Gossypium hirsutum (upland cotton): 107943963
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Entry
107943963 CDS
T04793
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107943963
03021 Transcription machinery [BR:
ghi03021
]
107943963
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107943963
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
107943963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_2
zf-C2H2_jaz
zf-C2HE
Zap1_zf1
ROS_MUCR
Motif
Other DBs
NCBI-GeneID:
107943963
NCBI-ProteinID:
XP_016733270
UniProt:
A0A1U8N2K4
LinkDB
All DBs
Position
A05:11928670..11931961
Genome browser
AA seq
360 aa
AA seq
DB search
MDEEKGERVSGPMFKDIRRYFCDHCGICRSKKSLITTHILTHHPEKIDNGGKEEEEVSMS
NECQECGATFRKPAHLKQHLQSHSLERPFVCLVDDCHASYRRKDHLNRHLLQHQGKLFSC
PIENCNSKFAFQGNMKRHVKEFHDEGSSSSDAASQKQYVCQEVGCGKVFKFASKLRKHED
SHVKLDSVEAFCSEPSCMKYFTNEQCLKAHVQSCHQYINCQICGAKQLKKNIKRHLRSHE
SGVASERIKCDFGGCLHTFSTKSNLRQHVKAVHEELKPFACSFSGCGMRFSYKHVRDNHE
KLALHVYVPGDFIESDEQFRSRPRGGRKRTCPTVEMLIRKRVAPPQMDTMMDPGPIQGCS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaaaaggagaaagagtatcaggaccaatgttcaaagacataaggcgttat
ttctgtgatcattgtggaatttgcagatctaagaagtctctcatcaccacccacatccta
acccaccacccggagaaaatagacaatggaggaaaggaagaagaggaagtttccatgtcg
aatgaatgccaagaatgtggtgctactttcaggaagcctgctcatttgaagcaacacttg
caaagccactctctcgagaggccatttgtttgtttagttgatgattgccatgctagctat
aggagaaaagaccatttgaatcgtcaccttcttcagcaccaaggaaaacttttcagttgt
ccaattgagaactgcaatagcaaatttgcgtttcaaggcaacatgaaaaggcacgtgaaa
gaatttcatgatgaaggttcatcttcctctgatgctgcaagccagaagcaatatgtctgc
caggaagtaggatgtggaaaagtgttcaagtttgcatcaaagctgagaaagcatgaagat
tctcatgttaagctggattcagttgaagccttctgttctgaaccaagttgcatgaaatat
tttactaatgagcaatgccttaaggctcatgtgcaatcatgccaccaatatattaattgt
caaatatgtggggcaaagcagctgaagaagaacatcaagcggcaccttcgatcacatgaa
tcaggagttgcatcagaaagaattaagtgtgattttgggggttgtctccatacattttca
actaaatcaaatctgcgtcagcatgtcaaggctgtgcatgaagaactcaagccttttgca
tgtagcttctctggttgtggaatgagattttcatacaagcatgtcagagataaccatgag
aaattagcactccacgtttatgttccaggggacttcatagagtcggatgagcagtttcgg
tcaaggccaaggggtgggcggaaaagaacatgtcccactgtggaaatgcttattcgaaaa
agagttgctccaccacaaatggatacgatgatggatccagggcctattcagggttgctct
taa
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