Gossypium hirsutum (upland cotton): 107944919
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Entry
107944919 CDS
T04793
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107944919
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107944919
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
107944919
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
107944919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_GCN1
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_GCN1_C
HEAT_2
TPR_CAND1
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
PDS5
Cnd1
INTS1_R4
MMS19_C
HEAT_Maestro
UTP20
Tti2
TPR_IMB1
HEAT_DAAF5
INTS7_N
VPS15-like_hel
Dopey_N
TPR_TTI1_C
Rif1_N
V-ATPase_H_N
IFRD
Npa1
mTOR_dom
SEN1_N
Motif
Other DBs
NCBI-GeneID:
107944919
NCBI-ProteinID:
XP_040954683
UniProt:
A0ABM3AIN6
LinkDB
All DBs
Position
D08:62548646..62559349
Genome browser
AA seq
1435 aa
AA seq
DB search
MEEALELARAKDTKVRMAAVERLYQLLEGTRKNLTSSEVTSIVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDGKQTVRDAARHLLVTLMEVSSPTIIVE
RAGSYAWRHKSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLSDPNLGVREAAI
LCIEEMYRQAGTQFRDELHRHQLPASMVRDINARLEKIEPQVRSSDGILGGFGSGEMKPA
ILNPKKSSPRAKSSSRESSLFAGESDITEKPIDPIKVYSEKELIREFEKISSTLVPEKDW
SVRIAAMQRVEGLVFGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRN
AVLRARCCEYALLILEHWPDVPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFNKT
WPDRSRRLFSSFDPAIQRIINEEDGGMHRRHASPSLRDRNVQMSFTTQTSSTSNIPGYGT
SAIVAMDRTSSLSSGTSFSSGMSLSQSKPLGKGAERTLESVLHASKQKVSAIESMLRGLD
ISEKQRSTSLDLGVEPPSSRDPPFPAVVPASHSLTSSLGLESSTSGVGKGSNRNSGLIMS
DIISQIQASKDSGKLSYRSSVATESLPTFSSYSAKRASERQDRGSFEENSDIREARRLTN
PHIERQYLEMPYRDVSSRDSHNNYIPNFQRPLLRKHVAGRMSAGRRRSFDDNQLSLGEMS
NYVEGPASLNDALSEGLSPSSDWSARVAAFSYLRSLLKQGPRGIQEVVQTFEKVMKLFFQ
HLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEI
VSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAVNPEGSGNIGILKLWLAK
LTPLAHDKNTKLKDAAITCIISVYTHFDPTAVLNFILSLSVEEQNSLRRALKQYTPRIEV
DLINFLQNKKERQRSKSSYDPYDVVGTSSEEGYIGVPKKSAFLGRYSSGSIDSEGGRKWG
TTQESTLITGSIGQATSDETRENLYQNFETSPNADVLLSKTNESSYMVYSMGQNLGSRNL
ESNFNLEGVSTPQLEINGLSRSDSLGAIGGVAHNYETSSGLDLNHLKPAAVKINSMPDAG
PSIPQILHMICNGNDESPTASKRSALEQLTEISAANDPSIWNKYFNQILTAILEVLDDSD
SSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNEAEHCLNTVLSQYD
PFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPSLFEAFGNQSAD
VRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDANQ
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcattggagctggcacgtgccaaagacaccaaggtgcgaatggcggcggtg
gaacggctttaccaactcctcgaaggtactagaaagaatctcacttcttcggaagtcact
tcgatagttgactgctgcttggatctcctcaaggacaacaacttcagagtctcccagggt
gctctccaggcacttgcttccgcggccgttctatccggtgatcacttgaagttgcacttt
aatgcgctcgttcccgcggttgttgaacggttaggtgacggcaaacagactgttagggat
gctgctagacatttactggtcactctcatggaggtttcttctccaactattatcgtcgaa
agagctggctcttatgcctggagacacaaaagttggagagttcgggaggagtttgcccgg
accgtgacatcagcaataagtctttttgcatctactgaacttccccttcaacgggctatt
cttccacctattttgcagatgttaagtgacccaaatcttggtgttcgtgaagctgctata
ttgtgcattgaggaaatgtataggcaggctggtacccaattccgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatatcaatgctagactagagaaaattgagcca
caagttagatcttcagatggaattttgggtggttttggttctggagagatgaagcctgca
atccttaaccccaagaaaagcagtccaagagccaagagttcttcgagggagtcatctctt
tttgcaggtgaaagtgatatcacagaaaaacccatagatccgattaaagtttactcagag
aaggagctgataagggaatttgagaaaatttcttctactcttgtgccggaaaaagattgg
tctgtacgcattgctgccatgcagagggttgaaggccttgtttttggaggagctgctgat
tatccatgtttccggggactcttaaagcagcttgttggcccactaagtacacaattatca
gatagaaggtcaagcattgtgaagcaggcttgccatttattatcattcttatcgaaggag
ctattgggagattttgaggcatgtgctgagatcttcattccagtccttttcaagttggtt
gtgattactgtgcttgtaattgcagagtctgctgataattgcataaaaacgatgttgcgt
aactgcaaagttgctcgtgtactacctcgcatagctgattgtgcaaagaacgaccgtaat
gctgtactccgtgccaggtgctgtgaatatgcattgttgatacttgaacattggcctgat
gtgcctgaaatacagcgatcggctgatttatatgaggatctgattagatgttgtgttgct
gatgcaatgagtgaggtaagatcaactgctagaatgtgctatagaatgttcaacaaaact
tggccagatcgttctcgtcgcttgttctcctcctttgatcctgccattcaaaggataatt
aatgaagaagatggagggatgcataggcggcatgcttctccttctctccgtgacaggaat
gtacagatgtcatttaccactcaaacttcttctacttcaaatatacctggatatggaaca
tctgctatagttgcaatggacagaacttccagtttatcttcagggacgtccttttcttct
gggatgagtttatcccagtcaaagccccttggtaaaggtgctgagcgtactctggagagt
gtattgcatgcaagcaaacagaaagtcagtgccatcgaaagtatgcttagaggtctggac
atttccgaaaaacagaggtcaacaagtttggatctaggagttgagcctccatcatctcgt
gatccaccattccctgctgttgttccagcttctcacagtctcacaagctctttaggacta
gaatcaagtacctctggtgtcggtaagggtagtaaccgtaacagtggtctgatcatgtct
gacatcatttctcaaattcaagcttccaaagactcgggcaagttatcatatagaagtagt
gtggcaacagagtctctgccaactttctcatcatactcggccaagagggcatctgaaaga
caagatcgtggttcctttgaagagaatagtgacatcagggaggccaggcggcttacaaat
ccacatattgaaaggcaatatttggaaatgccatacagagatgtaagctctagggattca
cataacaattacattcctaacttccaaaggccgcttttaagaaagcatgtagctgggcgt
atgtctgctggaaggagaagaagttttgatgataaccagctgtcacttggagagatgtca
aattatgttgaaggtccagcttctctcaatgatgccttaagtgagggacttagtcctagt
tctgattggtctgcaagggttgctgctttttcttatctccggtctttgttgaagcaaggc
ccaagaggtattcaggaagtggttcaaacttttgagaaggtaatgaaactgtttttccag
cacttggatgacccccaccataaagttgcacaggctgccctttcaactcttgcagatatt
attccatcatgccgaaagccctttgagagttacatggaaaggatcttaccccatgttttc
tcacgcttaattgatcccaaggagttggttaggcaaccttgctcaacgacattggaaata
gtaagtaagacttatagcatagattctctcttacctgctttgctgcgttcactggatgaa
cagcggtcgccaaaggcaaaattggctgttattgagtttgccattagttccttcaacaag
catgctgtgaatcctgaaggttctggtaacattggcatcctgaagttatggcttgctaag
ttgacgccattggcccatgataaaaatactaagcttaaggatgcagctattacttgcatc
atatctgtatacacgcatttcgatccaaccgctgttctgaattttattcttagtttatca
gttgaagaacaaaattccttgagacgggcacttaagcagtacacacctcgtattgaggtg
gatctaataaactttttgcaaaacaagaaagagagacagcgctctaagtcatcctatgat
ccctatgatgttgtaggaacatcatctgaagaaggatatattggtgtgcccaagaagagt
gctttccttgggaggtattcttccggttccattgatagtgaaggaggtaggaaatggggt
accacccaggaatcaaccctgatcactggcagtattggccaggcaacatctgatgaaact
cgggagaacttatatcagaactttgagaccagtccaaatgcagatgttcttctttctaaa
actaatgaatcatcttatatggtttattccatgggtcagaacttgggatctcgaaacttg
gaaagtaattttaacttggaaggtgtatctactccacaactggaaattaatggtctgagt
agatccgactcattaggggctattggtggggttgctcataattatgagacttcatcaggt
ttagatcttaatcaccttaaaccagcagctgtaaagattaactccatgccagatgctggg
cctagcattcctcaaattcttcacatgatctgcaatgggaatgatgagagccctaccgca
agtaagcgcagtgcacttgagcaattaactgaaatttctgcggctaatgatccctcgatt
tggaacaagtacttcaatcagattttgacagctatacttgaagttttagatgattctgat
tcttcaatcagagaacttgctctgtcattgatagttgaaatgcttaaaaaccagaaagat
gctatggaagattctgttgaaatagtaattgagaagctgcttcatgtaacaaaggatatt
gttccaaaagtttcaaatgaagctgagcactgcttgaacactgtgctgtctcagtatgat
ccattcagatgtttaagtgtcattgtacctttattagttactgaagatgagaagactcta
gttatttgcataaattgtttaacgaagcttgtgggccggctatcacaggaggaactaatg
gctcaactgccctcatttttgccttctctttttgaagctttcggaaaccagagtgcggat
gtccggaagacggtggttttctgtttggtggatatttatataatgcttgggaaagcattt
ttaccacacttggagggacttaacagcacacagttgcggttagttacaatctatgctaat
cggatttcacaggccaggactggtacccctatagatgctaaccaatga
DBGET
integrated database retrieval system
