Gossypium hirsutum (upland cotton): 107944962
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Entry
107944962 CDS
T04793
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107944962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107944962
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107944962
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107944962
NCBI-ProteinID:
XP_040971143
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Position
A01:117937785..117940881
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AA seq
698 aa
AA seq
DB search
MDASYSKTVRFRYDPENYNCSSTEKGHLSKFMTKKNYNQKTAIGHKKELSRVFSEDYEVV
EKTIFDPRGPDISRWNKLFLVACLISLFVDPLFLYLPQAKKGLCVTVSVPLEIDLTIIRS
VVDVFYVLQIFIQFRTAYVAPSSRVFGRGELVIDPSKIASRYLHKDFWLDIIAAQPLPQV
LVWSVIPKLNGSSMVPTKNILRLIIIFQYLLRLYLIYPLSSQIIKTTGVVTATAWAGAAY
NLMLYMLASHVLGATWYLLSLERQEECWRKVCSLPLLDCRYEYFDCRSVGDPARASWFNA
SNISSLCDPGSNFYQFGIYATALRIGITSEGFFEKYFYCLWWGLKTLSSLGQGLSTSTYV
GEIIFAIIIAILGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPHELRQ
NVRRYDQYKWVATRGVDEEMILKSLPVDLRRDIKRHLCLDLVRQVPLFDLMDDRMLDAIC
ERLKPCLCTPSTCIVREGDPVNEMLFIVRGYLDSFTTNGGRTGFFNSSRIGPGDFCGEEL
LTWALDPRPGVVLPSSTRTVKAITEVEAFALVSEDLKFVASQFRKLHSKQLKHTFRFHSH
QWRTWAACFIQAAWLRYKRRKEADALKKWESMVTGSPERMAEQTAAAPLSAAATGFASYA
AKLAASTRSRGGSSRCGNDFDILSTLQKPNEPDFTVER
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagttattcaaaaacagtaagattccgatatgatcctgaaaactacaattgc
tcatccactgagaaaggccatctctcaaaatttatgaccaagaagaactacaatcaaaag
actgcaattggccacaagaaagaactgtccagggtgttttccgaagactacgaggtcgtc
gagaagacgatattcgatcctcgaggacccgatattagccgatggaacaagcttttctta
gtagcttgtttgatttccttgtttgtagaccctttgttcttgtatcttccacaggcaaag
aaaggcttatgcgtgactgtttcagtacctctcgaaatcgatctcactattattcgatcg
gtagttgatgtgttttacgttcttcagatttttattcagttccgaacagcttatgttgct
ccgtcttctcgcgtgtttgggagaggagagttagtcattgacccttccaagatcgcttca
aggtaccttcataaggatttttggctcgatatcatcgcagctcaaccgttaccgcaggta
ttggtttggtctgtaattccaaaattaaatggttcatcgatggtgcctacgaaaaacatc
ctacgattaatcatcatattccaatatctcctaaggctataccttatttatccactttca
tctcaaatcatcaagactactggtgttgtgaccgcaacagcatgggccggtgcagcttat
aacttgatgctctacatgctagcaagccatgttttaggagcaacttggtatctgttatca
ctcgaacggcaagaggaatgttggagaaaagtttgtagtcttccccttttggactgccgg
tacgagtatttcgactgccgatcggttggtgaccctgctagagcttcttggttcaatgca
agcaacatatcaagtctatgtgatccaggcagtaacttctatcagttcggtatatatgcc
accgcattacgtattggaataacatccgaagggtttttcgagaagtacttctactgtctt
tggtgggggttaaaaactttgagttcattgggacagggtctttctacaagcacttacgtt
ggtgaaataatttttgcaatcatcattgctattcttggattggtgctttttgcattgctg
attggaaatatgcagacgtatctccaatccacaacggttcgacttgaagaatggcggatt
aggaggaccgatacagaacaatggatgcatcacaggcaacttccacatgaactgaggcag
aatgttcgaagatacgatcaatacaagtgggttgcgactcggggtgttgatgaggaaatg
attctaaagagtctaccggttgatctccgccgagacatcaagcgtcatctctgcctcgat
ttagttcggcaagtgcccctctttgatctgatggatgataggatgcttgatgcaatatgt
gaaaggcttaaaccttgtctttgtaccccatcgacgtgcatagttcgtgaaggcgatccc
gtaaatgagatgcttttcatcgtccgaggctacctagattcatttactactaatggagga
cgtacagggttcttcaactcgagccggatcggtcccggtgacttttgtggtgaggagtta
ttaacatgggcgttggaccctcgtccaggtgtcgtccttccatcgtctacacgcaccgtt
aaagcgatcaccgaagtagaagctttcgcactcgtttccgaggacttgaaattcgttgca
tcccaattccgaaaactacatagtaaacaacttaagcatacatttagatttcattcacat
caatggaggacatgggctgcatgctttatacaagcagcttggttacggtacaagagacga
aaagaggctgatgcgctgaagaaatgggagagtatggtgaccggttcaccggagagaatg
gcagaacaaacggccgctgcaccactttcagcggcagccacgggttttgcctcatatgcg
gcgaaactggcagctagcacaaggtcaagaggtgggagtagtaggtgtggaaatgacttc
gacatattaagcactttgcaaaagccaaatgaacctgattttacagttgaaagataa
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