Gossypium hirsutum (upland cotton): 107945066
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Entry
107945066 CDS
T04793
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107945066
04120 Ubiquitin mediated proteolysis
107945066
09126 Chromosome
03083 Polycomb repressive complex
107945066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107945066
04121 Ubiquitin system [BR:
ghi04121
]
107945066
03036 Chromosome and associated proteins [BR:
ghi03036
]
107945066
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107945066
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107945066
Cul7 complex
107945066
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107945066
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107945066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Methyltransf_16
Motif
Other DBs
NCBI-GeneID:
107945066
NCBI-ProteinID:
XP_016734393
UniProt:
A0A1U8N935
LinkDB
All DBs
Position
D12:4969104..4971261
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AA seq
246 aa
AA seq
DB search
MGSTSTKIKLRTSDQKVFEVEKAVAVQSQTIKYIYENGCPDSVIHVHSVSGDILSKILDY
CKKHVNSAAGKEDISPEELYEWDANFVKVDQNTLFDLILAANCLKIESLLDLTCQTVANM
IKGKRPEEIRTTFNIKNDYTIEAEEAVRRENKWAFDMLGGVGTMVIEELADDTMSKCVTN
TKSRVCVIAANQIVMMRSISKLANKKSIDVYKQPQNPTTPRIKESVKQRNVGTGFIELFF
HFKCKM
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgacatcgaccaagataaagttgaggacctccgaccaaaaggtttttgaggta
gagaaagcggttgcagtccagtctcagacgatcaaatacatttacgaaaatggttgcccc
gacagcgtcatccatgtccatagcgtctccggcgacatcttatccaagattctcgactac
tgcaagaagcacgtaaattccgccgctggcaaggaagacatttcccctgaggaactctac
gaatgggatgctaattttgtcaaggttgaccaaaacaccctcttcgacctcatcctggcg
gccaactgtttgaaaatagagagcttgttggacttgacatgccaaactgttgccaacatg
ataaaggggaagagacctgaggagattcgcactaccttcaacatcaagaacgattacacc
attgaggcagaagaggctgttaggagggagaacaaatgggcattcgacatgcttgggggt
gttggaaccatggttatagaagagttggccgatgatacgatgagcaagtgcgttacaaat
acaaagtcacgagtatgtgtaattgcggcaaatcagattgttatgatgaggtcaatttca
aagcttgcaaacaagaaaagcattgatgtatataagcaaccacaaaatcccacaacacca
aggattaaggaaagcgtcaagcagagaaatgttggaactggttttattgaactcttcttt
catttcaaatgcaaaatgtga
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