KEGG   Gossypium hirsutum (upland cotton): 107945095
Entry
107945095         CDS       T04793                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03015  mRNA surveillance pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107945095
  09122 Translation
   03013 Nucleocytoplasmic transport
    107945095
   03015 mRNA surveillance pathway
    107945095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107945095
   03041 Spliceosome [BR:ghi03041]
    107945095
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107945095
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   EJC/TREX
    107945095
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 107945095
NCBI-ProteinID: XP_016734435
UniProt: A0A1U8N642
LinkDB
Position
D13:complement(63295883..63299305)
AA seq 200 aa
MAGADVEAVDFEPEDDDLMDEDAAAGDASPQASMPKLKSAITGGASVSLSGPKKTKGRGF
RQDDADRHSHLASRDFDSIGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHNTFGEFGEI
KNLHLNLDRRTGFVKGYALIEYEKFEEAKNAISAMDGAELLTQTMNVDWAFSNGPSVGAS
KRKNIRAGRTHRSRSPRRRY
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgggtgctgacgtggaggccgtggatttcgagccggaggacgacgacctcatggac
gaggacgccgccgccggtgacgcctcacctcaagcctccatgcctaagctcaagtctgcc
atcactggcggcgcttccgtttctctttctggccctaagaagactaaaggccgtggcttc
cgccaggacgacgccgatcgtcattcccatctcgcctcccgcgactttgactctatcggc
tctgacggtggccccggtccccagagatctattgaaggatggataattttggtcactggt
gtacatgaggaagcacaagaggatgatttgcacaatacatttggtgaatttggtgagatc
aagaatttgcatttaaatcttgatcgtcgcactggatttgtcaagggatatgcactgatt
gaatacgaaaagtttgaagaagcaaagaatgccatatctgcaatggatggagcagaactt
cttacgcagactatgaatgttgattgggcctttagcaatggacccagtgttggagcctct
aagagaaaaaatattagagctggacggacacatcgctcgcgaagtcctaggagaagatac
taa

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