Gossypium hirsutum (upland cotton): 107945103
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Entry
107945103 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107945103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107945103
03051 Proteasome [BR:
ghi03051
]
107945103
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107945103
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107945103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
UBA_NBR1_C
XPC-binding
Dsc3_N
DUF5560
Rad60-SLD_2
RPW8
COG2p_C
Motif
Other DBs
NCBI-GeneID:
107945103
NCBI-ProteinID:
XP_016734444
UniProt:
A0A1U8N9J0
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All DBs
Position
D12:5752559..5758533
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AA seq
553 aa
AA seq
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MGGDGDSSESRLGDNGGGEEEGVMVNIRCSNGSKFTVRTKLESTIGSFKVVLAQSCDIPA
DQQRLIYKGRILKDDQTLQSYGLQADHTIHMVRSFAPSSSAPPPVATTNVGTPNATPGVT
RGVGSNEGAGLGASIFPGLNPLGGNGGSFGLFGSGLPEFEQEQQQLTQNPNMMREIMNTP
AIQSLVNNPELMRTLIMSNPQMREIIDRNPELGHILNDPSILRQTLEAARNPELMREMMR
NTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNNGNSPGSNPFAALLGNQGGSQ
ARDSPSNISVTGSESIQGQTSPNTNPLPNPWNNTVRGVTQTNTTARSNPAGDARTPGIGG
LGGLGLPDMPPMLNGMPDASQMTQLLQNPAISQMMQSIMSNPQYMNQIMNLNPQLREMFD
LNPQLREMMQNPEVLRQMFSPDTMQQMLSLQQSLMSQLNRQQTSQDSTQTSGTAGAPPTA
SLDLLMNMFGGLGAGGLSVPNQPDVPPEELYATQLSQLQEMGFYDTQENIRALRATAGNV
HAAVERLLGNSGQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggatggcgattcgagtgagtcaagactcggtgacaatggaggaggagaagaa
gagggagtgatggttaatatccgatgctctaatggttcaaaatttacggttaggaccaaa
ctcgaatcaaccataggatctttcaaagttgttttagctcagagttgcgatatcccagct
gatcagcaacgattgatttataaaggccgaatcttaaaagacgaccaaacccttcaaagt
tacggtttgcaagctgatcatactattcatatggtccgtagttttgccccatcttcatcg
gcccctcctcctgttgctactacaaatgttggaactccaaatgctacaccaggggtcaca
cgtggtgttggttctaatgagggtgctggtctgggagcatcaattttccctggacttaat
ccgcttggtggtaatggaggtagttttggtttgtttggatcaggacttcctgaatttgaa
caagaacagcaacaactaactcaaaatcccaacatgatgagggaaataatgaatacacct
gctattcaaagtttggtgaataacccagagttaatgcgcactttgattatgagcaatccc
caaatgcgtgagattattgaccggaatccagagcttgggcatatacttaatgatcctagc
attctgcgacagactttggaagctgctaggaatcctgaactcatgcgtgaaatgatgcga
aacactgacagggctatgagtaatattgaatcctctcctgagggatttaacatgcttagg
cgtatgtatgaaaatgttcaggagccatttttgaatgctacaactatggctggaaataat
ggaaattctccaggttcaaacccattcgcagctcttttgggcaatcaaggcggttctcaa
gctagggattcacctagtaacatttctgtaactggttctgaaagcattcaaggacaaact
tccccaaacacaaatcctcttcctaacccttggaacaacactgttagaggtgtaacccag
accaatactactgcgaggtcaaatcctgctggggatgctaggacaccaggtattggtggt
ctgggaggcctcgggcttccagatatgccacccatgttgaatggaatgccagatgcttct
cagatgactcaattgttgcaaaatccagctatatcacagatgatgcagagcataatgtct
aatccccaatatatgaatcagattatgaacctcaacccccaacttcgtgaaatgtttgat
ttgaatcctcaattgagagaaatgatgcaaaacccagaagtacttcgtcagatgttttcc
cctgatacaatgcagcaaatgctatctttacagcagtctcttatgtctcagctcaatcga
cagcaaacatcccaggattcaacacagacaagtggtactgcaggagcaccccctactgct
agtctggatttgttgatgaatatgtttggtggtctaggtgctggcggcctcagtgttccc
aaccaacctgatgttcccccagaagaactgtatgccacgcaattatcacaactccaagaa
atgggcttctatgatacacaagagaatatcagagcacttcgtgctactgcaggaaacgtc
catgctgcagttgagagactcctgggaaattctgggcagtaa
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