Gossypium hirsutum (upland cotton): 107945141
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Entry
107945141 CDS
T04793
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03020
RNA polymerase
ghi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107945141
09124 Replication and repair
03420 Nucleotide excision repair
107945141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107945141
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107945141
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107945141
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107945141
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
107945141
NCBI-ProteinID:
XP_016734489
UniProt:
A0A1U8N9N3
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All DBs
Position
A04:85725605..85728259
Genome browser
AA seq
318 aa
AA seq
DB search
MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
TSKDLYSSDHTVVPVDFTDYAGYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagcttcgtaccagcgattcccaagggtcaaaatccgggaactcaaagacgac
tacgctaaattcgagctccacgacaccgacgcttccatggccaacgccctccgccgcgtc
atgatcgccgaggttcccaccatagccatcgacctcgtcgaaatcgaagttaactcttcc
gtgctcaacgacgagttcatcgcccatcgactcggtctcatccctctcactagccaacgc
gccatgtcgatgcgattctctcgtgactgtgacgcctgcgacggtgacggacagtgcgag
ttctgctccgtcgagttccatcttcgcgccaaatgcataagcgatcaaacactggatgtc
accagtaaggatctatacagttccgaccatacggttgttcccgtcgatttcaccgattac
gctggctacgaatcctctgaacaaagggggattatcatcgtgaaattgcggcgagggcag
gagttgaggctgagggcaattgcaaggaaagggataggaaaagatcatgcaaaatggtca
cctgccgcgactgtgactttcatgtatgaacctgagattcacatcaatgaagatatgatg
gataccttgacccttgaggagaagcaaagctttgtcgacagtagtcctactagagtcttt
gacattgatcctaatacccaacaggttgtggtggttgatccagaagcatatacctatgac
gatgaagtattaaaaaaagctgaagctatgggcaagccggggctcgtggagatatatgcc
aaagaagacagtttcattttcactatcgaatctaccggtgcggtcaaagcttcccagtta
gtccttaatgctatagaaatccttaaacagaagctggatgcagttcgcctctctgaggat
actgtggaagctgatgatcagtttggtgaactaggtgctcacatgcgaggaggttga
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