Gossypium hirsutum (upland cotton): 107945318
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Entry
107945318 CDS
T04793
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00500
Starch and sucrose metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
107945318
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ghi00537
]
107945318
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
107945318
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ghi00537
]
Enzymes
107945318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
107945318
NCBI-ProteinID:
XP_016734766
UniProt:
A0A1U8N6N7
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Position
A08:complement(24857999..24861914)
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AA seq
486 aa
AA seq
DB search
MGCITVTIGIVCLFTLLWSVNGIGVNWGTQTSHPLPPDTVVRMLRENGIQKVKLFDADYG
ILKALGKTGIEVMVGIPNDMLASVGGSMKAAEKWVAKNVSEHISSNNVNIRYVAVGNEPF
LETYNGSYLHITLPALSNIQSALIKAGIGSQVKVTVPLNADVYASSNTYPSGGDFRTDIF
DPMLKIVKFLNDSNSPFTVNIYPFISLYTDSNFPVEYAFFDGNATPLNDGGTLYYNMFDA
NLDTLAHALQKNGFGNLPIIVGEIGWPTDGDRNANIEYARRFNQGFMSHISGGKGTPMRP
IPIDAYLFSLIDEDEKSIDPGNFERHWGIFYFDGQVKYPLNLGTTNSGALIPAKGVQYLE
RKWCVMKLSAPLDDPQVAQSVSYACGRADCTSLGYGTSCGNLDARGNISYAFNSYFQKNN
QLEDACKFPNVSVITKTDPTPTVGNCKFPIMIQPYYESAGRRFGCGQMPLPLVSVLLLLL
LTVVQL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggggtgtattacagttactatcgggattgtatgtttgtttaccttgttgtggagtgtg
aacggaattggtgtgaactggggaacacagacatcccaccctctgcccccagacacagta
gtaaggatgctgagagagaatgggattcaaaaagtgaagctttttgatgcagattatggt
atacttaaggctctaggtaagactgggattgaggtcatggtgggtatcccaaatgacatg
ctcgcttctgtgggtggcagcatgaaggctgctgagaaatgggttgccaaaaatgtctcc
gaacatatctcctccaataatgtcaacatcagatatgttgctgttggtaatgaacctttc
ttggagacatataatggaagctatcttcatataaccctccctgctcttagtaatatccag
tctgccctgatcaaagctgggattggcagccaagtaaaggttactgttcctctcaatgct
gatgtttatgcaagttcaaatacctatccgtctggtggtgatttccgtactgatatcttt
gaccccatgcttaaaattgtcaagttcttgaatgatagtaattctcccttcacggtgaac
atctatccttttattagcctctatactgattccaatttcccagttgagtatgcattcttt
gatggcaacgcgacgcctctaaatgatggtgggacattatattacaacatgtttgatgct
aatcttgatactcttgcacatgcattacaaaagaatggatttggaaatctgcctattata
gttggggagattgggtggcccactgatggagaccgaaatgctaacatagaatatgctcga
cgattcaatcaaggttttatgtctcatatttctggtgggaaaggaaccccaatgagaccc
ataccgatagatgcgtatttatttagcttgattgatgaggatgaaaagagcattgatcca
gggaattttgagcgccactggggtattttttattttgatggacaggttaaataccctctc
aaccttggaactacaaacagtggagcattaattcctgcaaaaggtgtacagtacttggag
aggaagtggtgtgtgatgaagctttcagccccacttgatgacccacaagtggcacaaagt
gtgagctatgcatgtggccgtgctgactgcactagcctcggttatgggacatcttgtgga
aacctagatgctaggggaaacatttcttatgcctttaacagttattttcagaagaataac
cagcttgaagacgcctgcaaatttccaaatgtttcagttataacgaaaacggatcccacc
cctacggtgggaaattgcaaatttccaataatgatccagccctattatgaatctgcagga
cggaggtttgggtgtggccagatgccattgcctttggtttctgttcttctcctcctattg
ctaacggttgtacaactctaa
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