Gossypium hirsutum (upland cotton): 107945405
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Entry
107945405 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107945405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107945405
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107945405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
107945405
NCBI-ProteinID:
XP_016734897
UniProt:
A0A1U8N712
LinkDB
All DBs
Position
D13:62971911..62975260
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AA seq
228 aa
AA seq
DB search
MKQSKDPFEAALEEQEESPPDSPVGEDELNSQTPNEPQNQTDGGHNLLVDDDDYDDMGPN
IKNPSHPSSSSTPKLHSTSVNANVATRATTKNKEYDDDEEEENVEVELSKFPSSADPAKM
AKMQAILSQFTENQMSRYESFRRSALQRSNMRRLLVSITGSQKISLPMTIVVCGIAKMFV
GELVEKARIVMTERTESGPIRPCHIREAYRRLKLEGKVPKRSVQRLFR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcaaaggacccattcgaagcagcattggaggagcaagaggaatcgccacct
gattccccagttggtgaggatgagctgaacagccaaactccaaatgaaccccagaaccaa
accgatggtggacacaatttacttgtagatgatgatgattatgatgacatgggtcccaac
ataaaaaatccctctcatccatcatcaagttcaactcctaagttgcactctacaagtgtt
aatgctaatgttgctactagagctaccaccaagaacaaagaatatgatgatgacgaagag
gaggaaaatgtggaagttgagcttagcaagttcccttctagtgctgaccctgctaaaatg
gccaagatgcaagccattttatcgcaattcacagagaatcagatgagtagatatgaatca
tttaggagatctgcgcttcaaaggtctaacatgagaaggttgttggtaagcataactggc
agccagaaaatttctttaccaatgaccattgttgtgtgtggtatagcgaaaatgtttgtc
ggtgaactcgttgagaaagctagaatagtcatgacagagagaacagaatccggaccaatc
aggccttgccacattagagaagcttatagaagattgaagcttgaaggcaaagtgcctaag
agatcagtgcaaaggctgtttcgctaa
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