Gossypium hirsutum (upland cotton): 107945416
Help
Entry
107945416 CDS
T04793
Name
(RefSeq) mechanosensitive ion channel protein 2, chloroplastic isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107945416
Transporters [BR:
ghi02000
]
Other transporters
Pores ion channels [TC:
1
]
107945416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
107945416
NCBI-ProteinID:
XP_016734910
UniProt:
A0A1U8N7H0
LinkDB
All DBs
Position
D12:21156880..21170064
Genome browser
AA seq
743 aa
AA seq
DB search
MSLSGSLQLSYDLGLCRNQVYKTKFKIVLGRGKLDLLSSDLSSRASFLQQHEQDVWRSSL
SNKLYRPMHFVPYRNNAFRCHAFGVPAQILELPGVKAASISLTRSYNTLQASPLALKLIP
AATIIIFSLYGVGPLIRRGRSLLLHKSDNSWKKSRTHYVTTSYVQPLLLWAGAILMCRTL
DPLVLPTEASQVVKQRLLNFVRSLSTVLAFAFCLSSTIQQMQKFFMETSDSSDTRNMGFQ
FAGKAIYSAVWVAAVSLFMELLGFSTEKWLTAGGLGTVLLTLAGREIFTNFLSSAMIHAT
RPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKT
HWRIKTHLAISHMDVHKISNIVADMRKVLAKNPQVEQQRLHRRVFLENINPENQALMILV
SCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSDADLENIPFADSMY
NHDGVQSNRPLLLIEPSYKINGEDRTKGRSSRPAGEQDGKTTVRPSADTKGDNKAGMIPK
PDSKSKGTPSVEPKANAKIGETPSSDTKENFKATFEPTSDDKVLLKSPSKSVSKTNSNAA
ETSSSSPKVPDSISDDLLKNKKVTDKQQKNARQSSELENPSLTLQETGIDKAGGLREPFQ
SKQEDEKLPVSQPPMTRSALEENIVLGVALEGSKRTLPIDEGLTSSAVDAKEVASSSRNG
NGSTAGDKKDGQILSTSKTPNNQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttctggttctttgcaattgtcctatgatttgggactttgcaggaaccaggta
tacaagacaaaatttaagattgtacttggaagggggaagttggatttattgagctctgac
ctctcatctcgtgcttcgttcctgcaacagcatgaacaggatgtttggagaagttcactc
tccaacaaattgtacaggccaatgcattttgttccatacagaaacaatgcctttaggtgt
catgcttttggagtacctgcccaaatattagaactgcctggtgtaaaagctgcatctatt
tcattaacaaggtcttacaataccttacaagccagtcctcttgcacttaagttgattcca
gccgctactattataattttttccctatatggtgttgggccacttattcgacggggtaga
agcctacttctccataagagtgataatagttggaagaagagtagaacacattatgttaca
acttcttatgttcaacctttgctgttgtgggctggagcaatactcatgtgcagaacactg
gatccattagttctccctacagaagctagccaagttgttaagcaacgacttttaaatttt
gtaagatcattgtcaactgtgttggcctttgcattttgcttatcgagcacgattcagcaa
atgcagaaattcttcatggagacgagtgattccagtgatacaagaaatatgggtttccag
tttgcagggaaagctatatactctgcagtttgggttgctgctgtgtcattgttcatggag
ttgctgggtttctctacagagaagtggctgactgctggaggtctggggacggttttgctg
actcttgctggtcgtgagatattcactaattttctttcaagtgcaatgattcatgcaact
cgaccttttgttgtgaatgaatggattcaaacaaagattgagggatatgaagtttctggc
actgttgagcatgttggttggtggtcaccaacaatagtaagaggggaagatcgagaagca
gttcacattccaaaccacaaatttactgtaaatgttgtgagaaatcttagtcagaaaact
cattggcgcattaaaactcacctggctatcagtcacatggacgtccataaaattagtaat
attgttgctgacatgcgcaaagtcctggctaagaatcctcaagttgagcagcagagattg
cacagaagagtatttctggaaaatatcaatcccgaaaatcaggctcttatgatactggtg
tcttgttttgtaaaaacttcccattttgaagagtacctatgtgtcaaggaagctatactt
ttggatctccttagagtcatcagccatcaccgtgcccggcttgccacaccaattcgcact
gtgcagaaaatatatagtgatgctgacttggaaaatattccttttgcagactcgatgtat
aaccatgatggagtacaatctaacaggcctctgttactgattgaaccctcttataagatc
aatggtgaagatagaacaaaaggccgttcttcccgtccagctggagagcaagatggtaaa
accacagtgcggcctagtgctgacactaaaggagacaacaaggcaggaatgataccaaag
cctgactccaagtccaaaggaacaccatctgttgaacccaaagctaatgccaagatagga
gaaactccaagctctgacaccaaggagaactttaaggccacatttgagccgacatctgat
gataaagtgctcttgaaatcaccatcaaaatctgtctccaaaacaaattctaacgctgca
gaaacatctagttccagcccaaaagttccagattcaatctcagatgatctgctaaaaaac
aaaaaggtcactgacaagcaacagaaaaatgctagacagagcagcgagttggagaaccct
tcattgaccttgcaggaaactggtattgacaaagcaggaggattacgagaacccttccaa
tcaaaacaggaagatgagaagctgccagtctctcagccaccaatgacaagatctgccttg
gaggaaaatatagttctcggtgtagcattagagggctcgaagagaacactacctatcgat
gaagggttgacctcatctgctgtagatgcaaaagaagttgcatcttcaagccggaatgga
aacggatccactgctggggataagaaagatggtcagattctatcgacttcaaagacccct
aacaatcagtga
DBGET
integrated database retrieval system
