Gossypium hirsutum (upland cotton): 107945461
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Entry
107945461 CDS
T04793
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107945461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107945461
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107945461
04121 Ubiquitin system [BR:
ghi04121
]
107945461
Enzymes [BR:
ghi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
107945461
Spliceosome [BR:
ghi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107945461
Complex C
U4/U6.U5 tri-SnRNP related factors
107945461
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
107945461
Chaperones and folding catalysts [BR:
ghi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
107945461
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
U-box type E3
107945461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107945461
NCBI-ProteinID:
XP_016734967
UniProt:
A0A1U8N777
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Position
D12:complement(27838771..27844009)
Genome browser
AA seq
596 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFELPVCTKDGSV
FDLMNIVPYIRKYGKHPVTGAPLKQEDLINLTFHKNSEGEYHCPVLNKVFTEYTHIVAVK
TSGNVFCYEAIKELNIKTKNWKELLTDEPFTKEDIITIQNPNALDSKVTLDFDHVKNSLK
VDDEELRKMSSDPTYNINVAGDIKQMLAELGTDKAKQAALLGGGGTRAQNERAAALAAIL
AARSRIKEDSKSDANGESKNQPAFSIVDAASASVHGRSAAAAKAASSDKTAARIAMHMAG
ERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDL
NIELHCDITPRTCENFITLCDRGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFN
DELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLSAME
KVPVDDNDKPLEEIKIISVTVFVNPYLEPDEEEEKEKSNGDKAAEDEDNDKIGSWYSNPG
TGTAESGAVGSGGVGKYLKARNTQSESATADTNITAISVTKKRKATPGEFKDFSAW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacagcacagcaaagatcgaatgttcataacgaagacggagtgggctacc
gagtggggcggcgctaaatccaaagaaaatcgtacccctttcaaacgccttcccttctat
tgctgcgcccttacattcacgcccttcgagttgcctgtatgcacgaaggatggcagcgtc
ttcgatttaatgaatatagttccctatattagaaagtatgggaagcatccggttactggg
gctccattgaagcaggaggatcttatcaatcttactttccacaagaactctgaaggggag
tatcattgccctgtgctgaacaaagtttttactgagtacacacacatagttgcggtgaag
acttcaggaaatgttttctgttatgaggcaattaaagaattaaacatcaagaccaaaaat
tggaaagagcttcttacagatgaacctttcactaaggaagatataattacaattcaaaat
cctaatgcacttgacagtaaggttaccctggattttgatcatgtaaaaaatagtttgaag
gtcgatgatgaagaactaaggaaaatgagttcagatccaacttataacattaatgtcgct
ggggatatcaagcagatgctagcagagcttggaactgacaaagcaaagcaagctgctctg
cttggaggtggtgggaccagggctcaaaatgagagggctgctgctcttgctgccatttta
gctgccaggtctcgcattaaagaggattccaagtcagatgcaaatggggagagtaaaaat
caacctgcgtttagtattgtagatgctgcatctgcttcagtacatggaagaagtgctgct
gcagcaaaagctgcatcaagtgataaaactgctgctcgaattgctatgcacatggctgga
gagagggcacctgtgaatgctaagatggtgaagagccgttatacaactggtgctgcttca
cgatcctttacttctacctcctatgatcctgttaccaaaaatgaatttgagtatgttaaa
gttgagaaaaatcctaaaaagaaaggttacgttcagctgcatacaacacatggtgatttg
aacattgagctgcactgtgatattactccaaggacatgtgagaacttcatcactctttgt
gatcgaggctattacaatggagtggccttccatagaaacattcggaatttcatgattcaa
ggtggtgatccaactggtactgggagagggggtgaatccatatgggggaagcctttcaat
gatgaacttaactctaagttgcttcactcaggaagaggtgttgttagtatggccaacagt
ggccctcacacaaatggttcgcagtttttcattctatacaaatctgcaaatcatttaaac
ttcaaacatactgtatttggtggagttgttggtggcttgacgacactgtcagctatggag
aaggttcctgtggatgacaatgacaaacctctggaagagattaaaataattagtgtcaca
gtatttgtaaatccgtacttggaacctgatgaagaggaagagaaagagaagagcaatggt
gacaaggcagctgaggatgaagataatgataagattgggtcgtggtatagcaatccagga
acaggaacagcagaatccggagctgttggtagtggtggtgttggaaagtacttaaaggct
aggaacacccaaagtgagtctgctactgctgataccaatataacagcaatttctgtaacg
aagaaaaggaaagccactcctggagaatttaaagatttttctgcttggtga
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