KEGG   Gossypium hirsutum (upland cotton): 107945511
Entry
107945511         CDS       T04793                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04144  Endocytosis
ghi04145  Phagosome
ghi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107945511
   04145 Phagosome
    107945511
   04148 Efferocytosis
    107945511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107945511
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107945511
   04031 GTP-binding proteins [BR:ghi04031]
    107945511
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    107945511
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107945511
  Exosomal proteins of other body fluids (saliva and urine)
   107945511
  Exosomal proteins of colorectal cancer cells
   107945511
  Exosomal proteins of bladder cancer cells
   107945511
GTP-binding proteins [BR:ghi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    107945511
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase Septin cobW AAA_16 nSTAND3 AAA_7 AAA_24 PduV-EutP IIGP AAA_22 AAA nSTAND1 NACHT DAP3 Sigma54_activat NTPase_1
Other DBs
NCBI-GeneID: 107945511
NCBI-ProteinID: XP_016735039
UniProt: A0A1U8NB49
LinkDB
Position
D12:34559662..34562144
AA seq 208 aa
MDVSKKRRTLLKVIVLGDSGVGKTSLMNQYVYNKFNQQYKATIGADFVTKELQIDDKLVT
LQIWDTAGQERFQSLGSAFYRGADCCVIVFDVNILRSFETLNNWREEFLKQADPSDPESF
PFIVIGNKIDIDGGNSRMVSEKKARDWCASKGNIPYFETSAKEDYNVDEAFLCVAKTALA
SEHEQHDIYFRGISETTSDVEQRGGCAC
NT seq 627 nt   +upstreamnt  +downstreamnt
atggatgtttctaagaagagaagaactctgcttaaggtcattgttctaggtgacagtgga
gtgggaaagacatctttgatgaatcaatatgtttataacaagttcaaccaacagtacaaa
gctacaattggagctgactttgtcaccaaagaattacagattgatgacaaattggtaact
ttgcaaatatgggatacagcggggcaagaaaggttccagagtcttggttctgcattttat
cgaggggcagattgctgtgttattgtgtttgatgtgaacatactcagatcatttgaaaca
ctaaacaattggcgtgaagaatttctgaaacaggcagatccatctgatcctgagtcattt
cctttcatagtaatcggaaacaagattgacatagacggtggaaatagccgaatggtttct
gagaaaaaagctagggattggtgtgcctcaaagggaaatataccttactttgagacttca
gcgaaagaggattacaacgttgatgaagcatttttatgtgtagcaaaaactgcactagct
agtgaacatgaacaacatgacatttatttccgaggtatatcagaaactacttcagatgtt
gagcagagaggagggtgcgcttgttga

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