Gossypium hirsutum (upland cotton): 107945584
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Entry
107945584 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107945584
03012 Translation factors [BR:
ghi03012
]
107945584
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107945584
mRNA cycle factors
Stress granule specific factors
107945584
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-4
107945584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
107945584
NCBI-ProteinID:
XP_016735128
UniProt:
A0A1U8NAZ7
A0ABM3B6B1
LinkDB
All DBs
Position
A12:complement(78054804..78062470)
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AA seq
1889 aa
AA seq
DB search
MSFNQSRSDKSEQQYRKSGRSASFNQQRSSSGVYSKGAGGGPAPSRSPSSSSSSLSSNRS
LKKSNNAQGGQYRLNSLAANSTESSNTSAARTKQNGAHLQPQLQGASDASIASNAAQPVQ
SPIIQNSTRAVSKAPTSQPPTIISDSGLPTTAGKEDPSKAFSLQFGSITPGFMNGMQIPA
RTSSAPPNLDEQKRNQARHDSSFKSVPNLPTPIPKQQLPRKDSVATEQSSFGEAHPVPKI
KKDAQPSAVPPVNQTQKPSPLNIPMTSMQMPFHHQPQVSIQYGGPNPQIQSQSVTASSMQ
MPIHIPLAMGNGPQVQQQVFVAGLQALPLPPQGMTHQGGGLSFTPPIGGQLTPQLGNLGM
GIAPQYSQQQGGKFGVTRKTTPVKITHPDTHEELRLDKRTDIRADGGSSVPRSHPNMPSQ
SQPIPSFAPSHSINYYSNSYSTNSVYYPPPSSLPLASSQIAPNAQGPRFNYPVSQGHQNI
SFMNSAAAPGSLAVNKSVNHAHGTSESVNVDTVRDAQNVISFATSGSTQVTVKPATVSAG
EKFEDSSFSSILPSTEKAGLLKHSMPACEVSLSQAQRDLDTFPESSVQQPKLGNESLTSE
SLPAAAKQSGGVPATNLDESQPSSCVSSASDSTSKESTPVFASNEGKKREGLSRSNSIKN
YQKKPVQEGQIQPPVQSTSTSYLGTNPAEYGFSSESAVTEALEAKKALTSLAAADVLSQS
TREFPTINEALPSSLDPKTESKIEGLNSVSSEVSGTGSKLDSFDLVKHAKFDGSSKLDEL
PRSEISGISDEEEKHLPEEHLKDSVSLEISSQPVPLKSTELKSDQDSASKVVATDNVVHT
QGTEHRVLNEDLSGKVENVEVSDSKDISTSRIADSTDIEGSHVTKSGILDQQSASVPSPD
LLESSSNYEGEGVLLPSSKDKPASQLSRTKSTITSGKQKRREILQKADAAGTTSDLYMAY
KGPEEKKETVAPSASAETSSVGVNLKQTSHEALQVDSIEREKITQSKAELDDWEDAADIS
TPNLETSDIDEKAHGGVPSHEEDGSGNITKKYSRDFLLKFAGQFTDLPQGFDIASDIAVA
LMAANVNASHAVDHDSYASPGRKLDRQSSGSRFDRRASGIVDDDRWIRPPGSFGPGRDLR
LDLGYGAVAGFRPVQGGNFGVLRHPWAQTPLPYLGGVPGGPMPHMSPHGGMQHSGPDADR
WHRGVMYQQKGLIPSPQTLLQTMHRAERKYQVGKVTDEEEAKQRQLKAILNKLTPQNFEK
LFEQVKAVNIDNAVTLTGVISQIFDKALMEPTFCEMYANFCQCLAGELPDFIKNNEKITF
KRLLLNKCQEEFERGEREQEEANKIEEEGEAKLSEEEREEKRIKARRRMLGNIRLIGELY
KKKMLTERIMHECIKKLLGEYENPDEEDVEALCKLMSTIGEMIDHPKAKVHMDAYFERMA
KLSNNMKLSSRIRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQSGRLARG
PGFNATARRAPMDFSPRGSMLSSPGSQMGSFRGLQGQPHGFGAQDVRMDDRQSLESRTLS
VPLPQRPTCDDSITLGPQGGLGRGMSFRGPPVMSSTPLANISPISGDSRTAGSNGFSSGS
ERMTYGPREDLMPRFGTDRFALTAAYEQPSSQERGMNFGNRDSRTPDCSFVRPLAASPST
QAQSSGFSQNIPPEKGWSEERLRNMSMEAIKEFYSARDEKEVVLCIKDLNSTSFHPTMIA
LWVTDCFERKDMERDLLAKLLVNLTRSHDGVLSQAELVKGFESVLSTLEDAVNDAPKAPE
FLGRIFGKMVVENVISMKEIGRLILEGGEEAGQIVEIGLGGDVMGSTLGMIKTEKGESVL
NEIRGSSCLRLEDFRPSHPNRSRILETFF
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatctaggtcggataaaagcgagcaacaataccgaaaatccgggcga
tcagccagttttaatcaacagcggtcctcctcaggcgtttacagtaagggcgctggcggc
ggccctgccccctcgcggtctccttcatcttcttcttcttctttatcttccaatcgaagt
cttaagaagtctaacaatgcacaaggagggcaataccggttaaattcactggccgcgaac
tctaccgagtctagtaatacttctgctgcccgcaccaaacaaaatggcgctcatttacaa
ccccagctacagggagcatcagatgcatcgattgcaagcaatgctgcccagcctgttcaa
tcacccatcatccagaatagcactcgagctgtttcaaaagctccaacttctcaaccaccc
accataatttccgacagtggtctccctacaaccgctggaaaggaagatccatccaaagca
ttctctttacagtttgggtccataactcctggtttcatgaatggaatgcagattccagct
agaactagctcagcacccccaaatttggatgaacagaaacgtaatcaggcacgccatgat
tcttcttttaaatctgttccgaatttgccgactcccattcctaaacagcagctaccaaga
aaggattcagttgcaactgagcaatctagttttggggaggctcatccagtgcccaagata
aaaaaagatgcacaaccctctgctgtaccccctgtgaaccagacacagaagccgtctcct
cttaatatacccatgacatctatgcagatgccatttcatcaccagcctcaggtttccatt
caatatggcgggcctaatccacaaattcagtctcaaagtgttactgctagttcaatgcaa
atgcctatccatatccccttagctatgggaaatggacctcaggtgcagcagcaagtcttt
gttgcaggtcttcaggctcttccattgccacctcaagggatgacgcatcagggtgggggc
ttaagtttcacgccacccataggtggccagcttacgccacaattgggcaacttggggatg
ggcattgcccctcagtattctcaacagcaaggtggaaagtttggtgttacacgtaaaacc
actcctgtcaagattactcaccctgatactcatgaagaattaaggcttgataaacgaaca
gatatacgtgcagatggtggttcatcagttccaaggtctcatcctaacatgccttctcaa
tcccagccaattccttcctttgcaccatctcattcaatcaattactattccaattcctat
agtaccaattccgtatattatccgccaccaagttcactgccattggctagtagccagata
gcacccaatgcccaaggaccgagatttaactatcctgttagccagggtcatcaaaacatt
tctttcatgaattcagcggctgcccctggttcattggcagttaataaatctgtcaatcat
gctcatggcacttcagaatcagtgaatgtggatactgtacgtgatgcacaaaatgttata
tcctttgctacctcaggttcaacacaggtgacagttaagccagctactgtttctgctggg
gagaagtttgaagattcctctttttcaagtatcttgccttctactgaaaaggctgggttg
ctaaaacactctatgccagcttgtgaggttagtttgtctcaggctcaaagggatttggat
actttcccggaaagctctgtacaacagccaaaacttggtaatgaatccttaacatccgag
tcattaccagctgcagctaaacaatctggtggagttccagcgactaacttggatgagagc
cagccatctagttgtgtatcttctgcttcagattccacatccaaggagtctacgccagtt
tttgccagtaatgaaggcaagaagagggagggattgagtaggtcaaactctataaaaaat
tatcagaagaaaccagtacaagaaggacaaattcagccaccagttcagtctacatcaaca
tcctacttgggtaccaaccctgcagaatatggtttttcctcagaaagtgccgtcactgaa
gctctagaggctaaaaaggctttaacatcattagcagctgctgatgttttgtcacaatct
accagggaatttccaaccattaatgaggctttgccttcgtccttagacccgaagacagag
agcaaaatagaaggcttaaactctgtttcttctgaagtttctggtactggcagtaaactt
gatagctttgaccttgtcaagcatgctaagtttgatggttcttccaagctggatgaacta
ccaaggtctgaaattagtggaattagtgatgaagaggaaaaacatttaccagaagagcac
ttaaaagacagcgttagccttgagatttcttctcaaccggttcccttgaaatctacggag
cttaaatctgatcaggactctgcttcaaaggtagtagctaccgacaatgttgttcatacc
caaggaactgagcacagggtactaaatgaagatttgagtggcaaggtagaaaatgtggaa
gtcagtgatagtaaggatatctcgacctctagaattgctgactctactgatatcgaaggt
agtcatgttactaaatctggcatattggaccagcagtctgcatctgtcccatctcctgat
ctcttagagtcaagttcaaattatgaaggggaaggtgttctgttacctagttcaaaggac
aaaccagcgtcacaacttagtaggacaaagagtactataactagtgggaagcaaaaaaga
agagaaattcttcagaaagcagatgctgccgggacaacttccgatctctatatggcgtat
aaaggtcccgaggaaaagaaagagactgtcgcaccttcagcaagtgcggaaaccagttct
gttggtgtgaatttgaagcagacatctcatgaggcccttcaggtggattccatagaaaga
gagaaaattacacagagtaaagctgaactcgatgattgggaagatgctgctgacatatct
acaccgaacttagaaacttcagacattgacgaaaaggctcatggaggtgtaccaagtcat
gaggaagatggaagtgggaatataacgaagaagtattcccgagatttccttcttaagttt
gctggacaatttactgatcttccacagggatttgatattgcttctgatattgcagtggcc
ttgatggctgcaaatgtcaatgcatctcatgctgttgatcatgattcatacgctagtcct
ggaagaaaattagataggcaatccagtggatctcgattcgatcgccgtgctagtggaatt
gttgatgatgacagatggattagaccacctggttcttttggccctggaagggatctgcga
cttgatcttggttatggtgctgttgcaggttttcggcctgtccaaggaggtaactttggt
gttctaaggcacccatgggcgcaaacacctcttccatatctcggaggggtccctggtgga
ccaatgccgcatatgagtccacatggagggatgcaacacagtggtcctgatgctgacagg
tggcatcgtggtgttatgtatcagcagaagggtttaattccctctccacagactctattg
cagacaatgcacagagctgaaaggaagtatcaagtgggtaaagtgactgatgaggaagaa
gccaagcaaaggcagctgaaggccattttgaacaagctaactcctcaaaattttgagaaa
ctctttgagcaagtaaaagctgttaacattgacaatgcagttacactcactggtgtcatc
tcacagatctttgacaaagctttgatggagcctactttttgtgaaatgtatgcaaacttc
tgccagtgtctggctggggagttgcctgattttatcaaaaacaatgaaaagataactttc
aagagattgctgctgaacaagtgccaggaggaatttgagagaggggagagagagcaagaa
gaagcaaataaaatagaggaagagggtgaggctaagctgtctgaggaggaaagagaggag
aagagaatcaaggctcgaagacgaatgttaggtaacattagacttattggggagttgtac
aagaagaaaatgttaactgagagaataatgcatgaatgcatcaagaaactacttggtgaa
tatgagaatcctgatgaggaagatgttgaggcattgtgcaaattaatgagtacgattgga
gaaatgattgaccatcctaaggcaaaagtgcatatggatgcttattttgagaggatggcg
aagttgtcgaacaatatgaaattgtcttctaggatcaggttcatgttgaaggatgctatt
gatctgagaaagaataaatggcagcagaggaggaaagttgaagggcctaaaaagattgag
gaagtgcacagagatgctgctcaagagcgacaagcacaatccggtaggcttgctcgtggt
cctggcttcaatgctactgcaagaagagcacccatggattttagtccacgagggtcaatg
ttatcttctccaggttctcaaatgggtagtttccgggggctgcagggtcaaccccatggt
tttggggctcaggatgttcgcatggatgacagacagtctttggagtctaggactctatcg
gttcccttgcctcaaagaccaacttgtgacgattctattactttgggcccccagggtggc
cttggtagagggatgtcttttagaggaccacctgtaatgtccagtactcccttagctaat
atttctccaatttctggagattcaagaactgctggatcaaatggttttagttctggatca
gagcgaatgacttatggtcctagagaggatctcatgcccagatttggaactgataggttt
gcactaacagctgcttatgagcagccgagttcccaggaacggggcatgaattttggtaat
agggactcgaggaccccggattgcagctttgttagacctcttgcagcttcaccttccaca
caagcccaatcatctggtttcagtcaaaatattcctcctgaaaagggctggtctgaggag
cgcctgcgtaatatgtccatggaggcaattaaagaattttacagcgctagagatgagaaa
gaagttgttttgtgcatcaaagatttgaattctacaagcttccatccaacaatgattgca
ctatgggtaacggactgttttgagagaaaagacatggaacgtgatcttttggcaaagcta
cttgtcaacctgacaaggtcccatgatggtgtattgagccaggctgaacttgttaaaggg
tttgaatctgtcctgagtacattggaggatgctgtgaacgatgcgccaaaagctccagaa
tttctgggacgtatttttgggaaaatggtagtggaaaatgtgataagtatgaaggagata
gggcggttaatactggagggtggggaggaagcagggcagatagtggaaatagggctgggc
ggggatgtaatgggtagcaccttggggatgattaaaacggagaaaggagaaagtgtgttg
aatgaaattagaggtagctcctgtttgcggctggaggactttcggccttcgcatcctaac
agatcaaggattttagaaacttttttttaa
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integrated database retrieval system
