Gossypium hirsutum (upland cotton): 107945587
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Entry
107945587 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107945587
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107945587
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107945587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
DUF5575_C
Motif
Other DBs
NCBI-GeneID:
107945587
NCBI-ProteinID:
XP_016735131
UniProt:
A0A1U8N7Q0
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All DBs
Position
D12:38644041..38645770
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AA seq
364 aa
AA seq
DB search
MHFILIYFNNLPSFVASFSFLLAASSMASPPALLGVTGVAVTAAENNATVPSHPSSSSTE
NVNPSIIIIVSILSITVIVSVCICLLLRHLNRRCLRRLSPSSTSTITASSAHRVSPEQSS
PPTTSLLDSLPLFTFSSITSRTNKDSTVSGDCAVCLSKFEPMDQLRLLPLCCHAFHAQCI
DTWLTSNKTCPLCRSPLLASDSDLIKLSLQFSNVSGVIGTGGSDSFRLEIGSISGRQPGS
ESVERGRSYSVGSFDYIVEEESEITRNQTHRRNLSDKEELGGAEPALEASLAGEVGNERS
WLKDYVDRLSSSLSSRTMSFRSSGRLFTGSSRRSEISGATEDYDVEANRIGEEISEMFRW
FSGV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcatcctcatctacttcaacaaccttccttcttttgttgctagcttttctttt
ttgttggcggcgtcatcgatggcttcaccacctgcgttgttaggcgttacgggagtagct
gtcacggcagccgaaaataatgccactgtaccctcgcatccttcttcttcttcgactgag
aacgtgaacccgagtataattataatagtttctatactttccattacggtgattgtttcc
gtatgtatttgtcttctccttcgccacctcaaccgccgttgcttgcgtcgcctctctcct
tcatctacgtccactatcaccgcttcttctgcccaccgtgtcagtcccgaacaatcatca
ccaccgacaacttcgttgcttgattcgcttcctttgttcacattctcttcaattactagc
cgcaccaacaaggattcaaccgtttccggagattgcgcggtttgtttgtccaaatttgaa
ccgatggatcaactcaggcttctccctctttgttgccacgcgttccatgctcaatgcatt
gatacttggctcacttcaaacaaaacttgccctctatgtcgctctcctctcttagcttcc
gactccgatctcataaagctttcgcttcagttttctaacgtatccggcgtgatcgggact
ggcggcagcgacagtttccggctggagattggctctatcagtggccgtcaaccaggctcc
gaatccgttgaacggggaagatcttattccgttggctctttcgattatatcgtggaggaa
gaatctgagattactaggaatcaaacgcatcggagaaacttgtccgataaggaagaactt
ggaggagctgagccagctttggaagcgagcctcgccggggaagttggtaatgagaggagt
tggcttaaggactacgtggataggctatcttcttccttatcgtctcgtaccatgtcgttt
cgcagctcaggtaggctctttaccggaagcagtcgccgaagcgaaatctccggcgccact
gaagattatgacgtggaagccaatcgcataggtgaggagatcagtgaaatgtttcgttgg
ttctcaggggtatga
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integrated database retrieval system
