KEGG   Gossypium hirsutum (upland cotton): 107945594
Entry
107945594         CDS       T04793                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107945594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107945594
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ghi02044]
    107945594
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107945594
Secretion system [BR:ghi02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   107945594
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 Beta-prop_RIG_2nd TPR_GEMI5 WDR55 TPR_Sec16 Beta-prop_EIPR1 MIOS_WD40 SRA1 EIF3I Beta-prop_SCAP Prp18
Other DBs
NCBI-GeneID: 107945594
NCBI-ProteinID: XP_016735141
UniProt: A0A1U8N7R2
LinkDB
Position
D12:complement(38760333..38769208)
AA seq 1111 aa
MACIKGVNRSASVVLAPDAPYMAAGTMAGAVDLSFSSSASLEIFKLDFQNDDRELTVVGE
YPSSERFNRLTWAKNGSASDEFSLGLIAGGLVDGNIDLWNPLTLIGSETSEQALIGHLSR
HKGPVRGLEFNAFAPNLLASGADDGEICIWDLATPAQPSHFPPLRGSGSAVQGEISFLSW
NSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRSSVLQWHPDVATQLIVASDEDG
SPALRLWDMRNIMSPVKEFVGHTKGVIAMAWCPSDSSYLLTCAKDNRTICWDTVTGEIVC
ELPAGTNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCCRYGVGEGDFGAVSLRAPKWY
KRPVGASFGFGGKMVSFCPRASGVGTSASSEVFVHYLVTEESLVSRSSEFESAIQNGERS
SLRVLCEKKSQESESQDDRETWGFLKVMFEDDGTARTKLLMHLGFSLPAEEKDTVQDDLS
RSLNDITLEDKVAEKVGHEVEKEATLFAADNGEDFFNNLPSPKTDTPVSPSGDNFAIESG
VPSEELIPQESDGLEESVDQSFNDAVQRALVVGDYKGAVNQCIAANKMSDALVIAHVGGA
SLWESTCDQYLKISHSPYLKVVSAMVNNDLMSLVKTRPLKFWKETLALFCTFAQREEWTV
LCDSLASKLMASGNTLAATLCYICAGNIDKTVEIWSRCLTTEHDGKSYIDLLQDMMEKTI
VLALATGQKQFSASLCKLVEKYAEILASQGLLLVAMEYLKLLGSYELSPELEILKDRIAL
SMEPEKETKSASFGNSHPTSGPVFDPSRHLYPESATSQIQPNVPTTYDESYQRSFPSYGG
YASPASYQAPANIFVPTPAPPHASQANFAPSSGTTQPAVRPFIPSNPPVLRNADQYQQPT
TLASQLYPGSANPTYPAPLASGSLASVPSQMGSVSGPKMPQVVAPPPASTGFMPVTNASV
VQRPGMSPMQPSSPTQPALLQPAPAPAAPPPTMQTVDTSNVPAHQKPVITTLTRLFNETS
QALGGSRANPAKKREMEDNSRKIGALFAKLNSGDISKNASDKLIQLCQALDNNDFGTALQ
IQVLLTTSEWDECNFWLATLKRMIKTRQNVR
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggcgtgtataaaaggggtgaatagatcggcgtcagtggtactggcgccggacgcgcca
tatatggcagcggggaccatggctggagcagtggatctatcattcagctcatcggcgagt
ctagagatctttaagcttgatttccagaatgacgatcgtgagcttaccgtcgtaggcgag
tatcccagctcagagcgctttaaccgcctcacttgggccaagaacggatccgcttccgat
gagttttcactcgggctcattgctggtggcctcgttgatggcaacatcgatctttggaat
cccttaaccctgattggctctgagacaagtgaacaagctctgattggacatctttcaagg
cacaaagggcctgttcgtggtcttgagttcaatgcctttgctccaaacttactagcgtct
ggggcagatgatggtgaaatctgcatctgggatttggcaacacctgcacaaccctctcat
tttccgcctcttaggggtagcggttctgctgttcaaggtgaaatttcatttctctcttgg
aatagcaaggttcaacatatattggcatcaacttcatataatggaacgactgttgtttgg
gacttgaagaagcaaaaaccagtgataagctttgcagattcagttagaagaagaagttct
gttttgcagtggcatcctgatgttgccactcaacttattgttgcatctgatgaagatggt
tcccctgcacttaggctctgggacatgcggaacataatgtcaccagtgaaggagtttgta
gggcacacaaaaggtgtaattgcaatggcatggtgtccctctgatagctcttatttgctg
acatgtgccaaagataataggactatttgttgggatacagttactggagagattgtctgt
gaactgcctgctggtacgaactggaactttgatgttcactggtatccaaagatacctgga
gtgatatcagcatcttcctttgatggcaagattggaatttacaatattgagggttgctgc
cgatatggtgttggggagggtgattttggtgcagtgtctttgagagctccaaaatggtat
aaacgtcctgttggggcttcttttggttttggaggaaaaatggtctctttttgccctcgg
gcatctggtgtaggcacttctgcatcatcagaggttttcgtgcattacttagttaccgaa
gaaagcctggtcagccgttcatctgaatttgaatctgcgatacagaatggggagaggtct
tcactaagggttttatgcgaaaagaaatctcaagagtctgaatctcaggatgatcgagaa
acatggggcttcttgaaggtgatgtttgaagatgatggaacagctaggacaaagttgctt
atgcatcttggctttagtctacctgcagaagaaaaagatactgtacaagatgacctctca
cggagtctgaatgatattacacttgaggataaagttgcagaaaaagtaggccatgaagtt
gagaaagaagctactctctttgcagctgataatggcgaagatttcttcaataatcttcca
agtcccaaaactgatacgcctgtttctccatctggtgataattttgccattgaaagtgga
gttcctagcgaagagttaatacctcaagaatcagatggactggaggaaagtgtagatcaa
tcatttaatgatgctgttcaacgcgctttggtggtgggtgactataaaggggctgttaat
cagtgcattgcagcaaataaaatgtctgatgctttagttattgctcatgttggtggtgct
tcattatgggagagcacatgtgaccaatatctaaagattagccattcaccatacctgaag
gttgtctctgcaatggtgaacaatgatctcatgagccttgtcaagaccagacctttgaaa
ttctggaaagaaacattagctctcttctgtacatttgcccagagagaggagtggactgta
ctttgtgattcgcttgcttcaaaactaatggcctctggtaatactctggcagcaactctt
tgttatatatgcgctggaaacattgataaaacagtagagatttggtcaaggtgcctgaca
actgaacatgatgggaaatcttacattgatcttctccaggatatgatggaaaagaccatt
gtcttggctttggcaactggacagaaacaatttagtgcatctctatgcaagcttgttgag
aaatatgctgaaattttggctagtcaggggcttctattggtagcaatggagtacctgaaa
ctcttggggtcttatgagctgtcacccgaactcgagatcttaaaagatcgtatagcactc
tctatggaacctgagaaagaaactaaatctgctagttttggtaattctcatccaacaagt
ggaccagtctttgacccttcgcgacatttatatccggagtcagccacatcgcaaattcag
ccaaatgttcctactacttatgatgaaagttatcagcgttcttttccatcatatggagga
tatgcttctcctgcctcgtatcaagctcctgccaatatctttgttccaacccctgctcct
cctcatgcatcccaggcaaatttcgctccttcatctggcaccactcagcctgctgttaga
ccctttattccttctaatcctcctgttctacgaaatgcagatcaataccagcagccaact
accttggcttctcagttatatcctggtagtgccaaccctacttatcctgcaccccttgct
tctggttcacttgcatctgtcccatcacaaatgggatcagtttctggccccaaaatgccc
caagttgttgctccccccccagcatctacaggatttatgccagtaactaatgcatctgtt
gttcaaagacctgggatgagcccaatgcaaccatccagccctacacagccagcattacta
caaccagctccagcacctgctgctcctccaccaaccatgcagactgttgatacttcaaat
gtccctgcacaccagaaacctgtaatcacaaccttaaccagacttttcaatgaaacatct
caagcactgggaggctcacgagcaaacccagctaagaagcgtgaaatggaagacaattca
agaaaaatcggtgccttgtttgccaaactcaacagtggagacatttcaaaaaatgcttcc
gataagcttattcaactctgccaggctttggacaataatgattttggtacagctctacaa
atccaggttcttcttactactagtgagtgggatgagtgcaacttttggcttgcaactcta
aagcggatgattaagacaaggcagaatgtaaggtaa

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