Gossypium hirsutum (upland cotton): 107945710
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Entry
107945710 CDS
T04793
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107945710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107945710
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107945710
03012 Translation factors [BR:
ghi03012
]
107945710
04131 Membrane trafficking [BR:
ghi04131
]
107945710
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107945710
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107945710
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107945710
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107945710
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107945710
Exosome [BR:
ghi04147
]
Exosomal proteins
Proteins found in most exosomes
107945710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
107945710
NCBI-ProteinID:
NP_001314421
UniProt:
Q3LUM2
LinkDB
All DBs
Position
D12:28021516..28024237
Genome browser
AA seq
448 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMIKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKSAAKKGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaacattgttgtcattggccatgttgactctggaaag
tcaaccacaacgggtcacttgatatacaagcttggaggtattgacaagcgtgtgatcgag
aggttcgagaaggaagctgctgagatgaacaaaaggtcattcaagtatgcctgggtgctc
gacaagttgaaggctgagcgtgagcgtggtatcaccattgatattgccttgtggaagttt
gagacaaccaagtactactgcactgtcattgatgctcctggacatcgcgactttattaag
aatatgattacgggtacttctcaagctgactgtgctgtccttatcattgactccacaact
ggaggttttgaagctggtatttccaaggatgggcagacccgtgagcatgctctccttgcc
ttcacccttggtgtcaagcaaatgatttgctgctgcaacaagatggatgccacaaccccc
aagtactcaaaggcaaggtatgatgaaattgttaaggaagtttcttcttacctgaagaag
gttggttacaaccctgagaagattccattcgtccccatctctggttttgagggtgacaac
atgattgagaggtccaccaacctcgattggtacaagggtccaaccctccttgaggctctt
gaccagatcaatgagcccaagagaccctctgacaagcccctccgtctcccacttcaggat
gtctacaagattggtggtattggaactgtcccagtgggtcgtgttgaaactggaatcctc
aagcctggaatggttgttacattcggaccttctggattgaccactgaagttaagtctgtt
gagatgcatcatgaagctcttcaagaggctcttcctggtgacaatgttgggttcaatgtg
aagaatgttgctgtcaaggatctcaagcgtggatttgttgcctccaactccaaggatgat
cctgccaaggaggcagccaacttcacctcccaagttatcatcatgaaccacccaggacag
attggaaatggctatgcaccggtcctcgattgccacacctcccatattgctgtcaagttt
gcagagctcttgaccaagattgacaggcgatctggtaaggagcttgagaaggagcctaag
ttcttgaagaatggtgatgctggtatgattaagatggttccgaccaagcccatggttgtg
gaaactttctccgagtaccctccacttggacgttttgccgttagggacatgagacagact
gttgctgttggtgtgatcaagagtgtggagaagaaggacccaactggagccaaggtgacg
aagtctgctgccaagaagggcaagtga
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