Gossypium hirsutum (upland cotton): 107945949
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Entry
107945949 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107945949
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107945949
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
107945949
NCBI-ProteinID:
XP_016735611
UniProt:
A0A1U8N928
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Position
A08:50435713..50441226
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AA seq
452 aa
AA seq
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MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGQ
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKTALDGRIIPRYL
LSENISPCTLRITYSAHPDLSVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSLGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDVQTAVLAK
GTLEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNPAMVNPQPSTLRQQPVQA
MGGPAAHQYNGAPYASGLQQPTMLPQPSGGWTSTVPAVAQQSMPVQMSNHHPYIPPSSMP
QTNPGMMRMPGQGGVPPDAAGGAMPPYRSNQM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtatcaagtcagccgcagttccgttacactcaacccccatctaaggtgctg
catttgagaaacttgccatgggagtgtacggaggaagagttgatcgagctggggaagcca
tttggtaaggtcgttaacaccaagtgcaatgttggagccaatcgtaatcaagctttcatt
gaattcgctgacttgaatcaagctattgccatgatatcgtattatgcttcatcttcagag
cctgctcaagtaaggggtaaaacggtctacctgcaatattctaacaggcaagaaattgta
aacaacaaaacgactgcagatgttgccgggaatgtactgttggtaacaatcgaaggtcaa
gatgcacggcttgtttccatagatgtattgcacttggtattttcagcttttggatttgtg
cataaaattactacctttgagaagacagctggatttcaggctttggtgcagttttcagat
gcagaaacagccacatctgcaaaaactgccttggatggacgaatcatccctaggtacctg
ctttctgaaaatatatctccatgtacacttaggattacttattctgctcatccagatttg
agtgtgaagtttcagagccacagaagcagagattataccaatccctatcttcctgtcgct
ccttcggctatagatggaagtggccagtttagtttgggtcttgatgggaaaaaactcgaa
ccagaaagtaatgttttacttgcatcaatcgagaacatgcagtatgctgttacattggat
gtgctacacatggtcttctctgcttttggtcctgttcaaaagattgccatgtttgataag
aatggtggactacaggcactaattcagtacccagatgttcagacagctgttttggctaag
ggcaccttggaagggcactgcatatatgatggaggattttgcaagctccatctctcatat
tcacgccacactgatcttagtataaaggtcaacaatgatcggagcagagattacacaatc
cctaacccggccatggttaaccctcagccttcaacattgaggcaacagccagttcaagca
atgggtggtccagctgctcatcaatacaatggggctccatatgcttcagggttacaacaa
cctacaatgctgcctcagccttcaggtggatggacctcaactgttccggcagtggcgcag
caatccatgccagtgcagatgagtaatcatcatccttacataccaccatcctcaatgcct
caaacgaatcccggaatgatgcgaatgccaggccagggaggtgtaccaccagacgcagca
ggtggggcaatgcctccttacagatccaatcagatgtaa
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