Gossypium hirsutum (upland cotton): 107945987
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Entry
107945987 CDS
T04793
Name
(RefSeq) proline--tRNA ligase, cytoplasmic
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107945987
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107945987
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107945987
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
107945987
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
107945987
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107945987
Prokaryotic type
107945987
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
107945987
NCBI-ProteinID:
XP_016735651
UniProt:
A0A1U8N968
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Position
D12:complement(42849478..42854657)
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AA seq
514 aa
AA seq
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MAGGEQKKGGGEQKKAGGGGKKKEVKKETGLGLSFTKDENFGEWYSEVVVNGEMIEYYDI
SGCYILRPWAMSIWENMQTFFDAEIKKMKVKNCYFPLFVSPGVLQKEKDHIEGFAPEVAW
VTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIR
SREFLWQEGHTAFATKEEADTEVLQILELYRRIYEEFLAIPVTKGRKSELEKFAGGLYTT
SVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKSMVWQNSWAYSTRTIGVMVM
VHGDNKGLVLPPKVAALQVIVIPVPYKDADTQGIFDACAATVAILSDAGIRAEADLRENY
SPGWKYSNWEMKGVPLRIEIGPRDLANNQVRAVRRDNGEKTDISRVFLVEQVKGMLEKIQ
QNLFDVAKQKRDACIEVVKTWDEFIKALGQKKLILAPWCNEEEVEKDVKARTKGEMGAAK
SLCTPFEQPELPEGTKCFASGKPATKWTYWGRSY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggggagcagaaaaagggtggaggggagcagaaaaaggctggcggtggaggg
aaaaagaaggaagtgaagaaggaaactggtttgggtctctcctttaccaaggatgagaat
tttggtgaatggtactctgaggttgttgtcaatggtgaaatgattgagtactatgacatt
tctggatgttatattcttaggccatgggcaatgtcaatatgggagaacatgcaaacgttc
ttcgatgcggaaatcaagaaaatgaaagtcaagaattgttatttccctctttttgtatct
ccgggtgttttgcaaaaggagaaggatcacatagagggttttgctcccgaggttgcttgg
gtgacaaaatctggtgagtctgatttggaggtgccaattgctatccgcccaactagtgag
acagttatgtatccctactattctaagtggatcagaggacaccgtgacttgcctttgaag
cttaaccagtggtgcaatgttgttcgatgggagtttagcaaccccacaccatttatcagg
agtcgtgaatttctatggcaggaagggcatactgccttcgcaaccaaggaagaggcagac
actgaggttcttcaaatattggagctataccgacgtatatatgaagaattcttggcaatt
cctgttacgaaaggcaggaagagtgaactggagaagtttgctggtggactttacacaacc
agcgttgaggcatttattccaaacactggccgtggtattcaaggtgcaacctcccattgt
ttgggccaaaacttcgcaaaaatgtttgagataaactttgaaaatgaaaagggggaaaag
tctatggtctggcagaattcctgggcatatagcactcgaacgattggggtaatggtgatg
gttcatggggataacaaaggcttagtgctgcctccaaaagtagcagctttgcaagttatt
gtgattcctgtgccctacaaagatgcagatactcaaggtatctttgatgcctgtgctgcc
actgtggcaatcctctctgatgctggtattcgtgctgaagctgatcttagagagaactac
tcacctggttggaagtactcaaactgggaaatgaaaggtgttccactaaggattgaaata
ggacctcgagacttggcaaataatcaggtgcgtgcagttcgccgtgacaatggagaaaag
actgatatctctagagtctttttggttgaacaagtaaaaggaatgttggaaaagattcaa
cagaacctatttgatgtggcaaaacaaaaaagagatgcctgcattgaagttgtaaaaact
tgggatgagtttataaaagctctcgggcaaaagaaactgatcttagctccttggtgtaat
gaggaggaggtggagaaagatgttaaagctcgaacaaagggtgagatgggagcagctaag
tctctatgtaccccatttgaacagcctgaacttccagaaggtactaaatgctttgcttct
gggaagcctgcaacaaagtggacctattggggcagaagttactag
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