Gossypium hirsutum (upland cotton): 107945989
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Entry
107945989 CDS
T04793
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107945989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107945989
04147 Exosome [BR:
ghi04147
]
107945989
04090 CD molecules [BR:
ghi04090
]
107945989
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107945989
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107945989
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107945989
CD molecules [BR:
ghi04090
]
Proteins
107945989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_30
DLIC
DUF87
AAA_25
DUF815
Motif
Other DBs
NCBI-GeneID:
107945989
NCBI-ProteinID:
XP_016735654
UniProt:
A0A1U8N9K0
LinkDB
All DBs
Position
D12:complement(42865239..42870415)
Genome browser
AA seq
1285 aa
AA seq
DB search
MATENGSNGDTNLHEASTSKNQEQLNGENKDTETNKKNEKTNSIPFYKLFAFADRTDTML
MIIGTIGAIGNGLCMPLMTTILGDLIDAFGQNQSNDRVVHVVSRVALRFVYLAAGAGTAA
CLQVSCWMVTGERQAARIRGLYLKTILRQDIAFFDVETTTGEVVGRMSGDTVLIQDAMGE
KVGKFLQLVSTFLGGFVIAFVRGWLLAVVMMSAIPLLVTAGGAMALIISKMVSRGQAAYA
KAGTIVEETIGSIRTVASFTGEQQAISKYSKLLVTAYKSGVHEGTAAGLGLGVAMMILFC
SYGMAVWFGGRLILNNGYTGGQVINVIVAVLIGSLSLGQSSPCMSAFAAGQAAAVKMFET
INRKPEIDPYNMSGKVLEDINGDVELRDVYFSYPARPEEQIFSGFSLSIPCGTTVALVGE
SGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFTASIKDNI
AYGKEGATVEEIRAAAELANAANFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKD
PRILLLDEATSALDAESERVVQEALDRIMGNRTTVIVAHRLSTVRNADSIAVIHRGKMVE
KGSHSELLKDPEGGYSQLIRLQEVNKESEQVTDVSEVNPESFRQSSLRRSMKGSISRGSS
IGSSSRHSLSIAFGVPTGIEANEPAVVETEDSTEQSSKYPEVPIRRLAYLNKPEIPVLLL
GTIAATINGCILPIYGLLISRVIETFYKPPHELRQDTRFWALIYVALGSAALLACPSRTY
FFSVAGCKLIQRIRLMCFSKVVHMEVGWFDEPDNSSGSIGARLSADAATIRALVGDALAQ
MVSNLASAVAGLVIAFVASWQLAFIIIGLIPLLGVNGYVQIRAMKGFSADAKMMYEEASQ
VASDAVGSIRTVASFSAEEKVMELYRKKCEGPLKAGIRQGLISGGGFGLSFFLLFNVYAT
SFYSGSRLVESGDATFSDVFQVFFALTMATVGISQSSTLAPDSSKARSAAASIFAIIDRK
SKIDPSDESGTTLENVKGDIELSHVSFKYPLRPDIQIFQDLNLSIPAGKTVALVGESGSG
KSTVISLLQRFYDPNSGRITIDGVEIQTLQLKWLRQQMGLVSQEPILFNETIRANIAYGK
GGNATEAEILAASELANAHKFISSLQQGYDTLVGERGVQLSGGQKQRVAIARAIVKSPKI
LLLDEATSALDAESERVVQDALDKIMVDRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGK
HDTLINIKDGFYASLVALHMSASTS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggctactgagaatggctcaaatggtgataccaacttacatgaagccagcacatcaaaa
aaccaagaacagcttaatggagaaaataaagacacagaaaccaacaaaaagaatgaaaaa
accaactctattccattttacaagctgtttgcattcgccgatcggacagataccatgtta
atgatcatcggcacgatcggcgcgattgggaacggtttatgtatgccacttatgacaacc
atacttggagatcttattgatgcttttggacaaaaccagagtaacgaccgagtagttcat
gttgtctcaagggttgctttaagatttgtctacctcgctgccggggccggaacggcggct
tgtcttcaggtgagttgctggatggttacaggtgaaagacaagctgcaagaataagaggt
ttgtacttaaaaaccatattgagacaagatatagctttctttgatgtggaaacaactacg
ggagaggtcgttgggcgtatgtccggtgacacggttctcatacaggacgcgatgggcgaa
aaggttgggaagtttttacagttggtgtctacattcttaggaggttttgttatagcattt
gttagaggatggctccttgctgttgtcatgatgtcagctatacctctacttgtaacagct
ggtggagcaatggctcttattatatcgaagatggtgtctcgaggacaagcagcgtatgct
aaagccggcaccatcgttgaagagacaattggttctatcagaactgttgcgtcatttact
ggtgagcagcaggctataagtaaatatagcaagcttcttgttactgcgtataaatcaggt
gttcatgaagggactgctgctggacttggtctcggtgtagctatgatgatcttattctgc
agttatggtatggctgtatggtttggtgggaggttgattttgaacaatggatacaccgga
ggtcaagtcattaatgtgattgtcgcggtattgattggttctttgtccctggggcaatca
tcaccatgcatgagtgcatttgctgctggtcaagctgcggcggttaagatgttcgagact
atcaataggaaaccggagattgacccatacaatatgagtgggaaagtgttggaggacatt
aacggcgatgtagaactgagggatgtttatttcagttatcctgctagaccagaagagcaa
attttcagtggattctctctttctattccatgtggtacaacagttgctttggttggagaa
agtggaagtgggaaatcaactgtaattagtcttatagaaaggttttacgatccacaagcc
ggtgaagtgcttatcgatggtattaatcttaaagagtttcaacttagatggattagggga
aaaattggccttgttagccaagaacctgtgttgtttacagcaagtataaaggataatatt
gcatatggaaaagaaggtgcaaccgtagaagagatacgagccgctgctgaacttgcaaat
gctgctaacttcattgataaactacctcaggggctagacaccatggttggagagcatgga
actcaactttctggtggacaaaagcaaagagtagcaatagcaagagcaattctaaaggac
cctcggatattgcttttagacgaagcaacaagtgcattagatgctgaatccgaaagagtg
gtgcaagaagcattggaccgcataatgggcaataggactacagtcattgttgctcatcgt
ttgagtaccgtgagaaatgcagattcgattgccgtaattcatcgaggaaagatggttgaa
aaagggtcacattcagaactactcaaggatccagagggagggtactcacagcttattcga
ttacaagaagtaaataaagagtcggaacaagtaacggatgtatcagaagttaacccggaa
tcatttagacaatcaagcttgagaagatcaatgaagggatcaatcagtaggggatcatct
atcggaagtagcagccgccattctttatctatagcctttggtgtgcctactggaatagaa
gccaatgaacctgcagtagtagaaaccgaagactctactgaacagtcatcaaagtatcca
gaagttcccatccgtcggctagcttacctcaacaagccagagattcccgtgctcctactc
ggaactatagctgcgactatcaatggttgcatacttccgatttacggtttactgatttcc
cgtgtgattgaaacattctataaaccacctcatgagttaagacaggatacaagattctgg
gcactgatatatgtggcccttggctcggcagcattattggcatgtccatcacgaacgtac
ttcttttcggttgctggatgtaaactaatccaacgaatccgattaatgtgtttttcaaaa
gtggttcacatggaagttggttggtttgatgaaccagataattcaagtggttcaattggt
gcaaggctctcggccgatgcagccacaatacgtgccttggttggtgatgcactagctcaa
atggtctcaaaccttgcatcagccgttgccggtttagtcattgcttttgttgcgagttgg
caattggcatttataatcataggactaatccctttgttaggggtcaatggatatgttcaa
ataagagccatgaagggatttagcgccgacgcaaagatgatgtacgaggaggcaagccaa
gttgctagtgatgcagtcgggagtatacgaacggttgcttcattttctgccgaggaaaaa
gtaatggaactctatagaaagaaatgtgaaggtccattgaaagcagggataaggcaaggg
ttgattagtggaggcggatttggactttcgttcttcttgctctttaatgtttacgccacc
agtttctactccggatctcgactcgttgagagtggcgatgccacattctctgatgttttt
caagttttctttgctttgacaatggcaactgttggcatttctcaatcaagcacccttgct
cctgattccagcaaagccaggtcagctgctgcttccatattcgcaattatcgaccgtaag
tctaagatagacccgagtgacgagtccggaacaacattagaaaacgtgaagggtgatatc
gaactttctcatgtcagtttcaagtatccattaagaccagacattcaaattttccaagac
ttgaatttatctatccctgctggcaagactgttgcattggtaggagaaagtgggagtggg
aaatccaccgtgatatcattattacagagattttacgatcccaattcgggacgtatcact
atcgatggagtcgaaatccaaacactccaattgaaatggttgaggcaacaaatggggctt
gttagccaagaacctattttgtttaatgaaacaatccgtgctaacatcgcatacggaaag
ggaggaaacgcaaccgaggctgaaatcttagctgcatcagagttagccaatgctcacaag
ttcataagttcattacaacagggttacgatacattagtaggcgaacgaggtgtccaatta
tcaggtggacaaaagcaaagggtagccattgcacgagccatagttaaaagtccgaagata
cttctcctagacgaagcaacaagcgcattggatgccgaatcggagagggtggtccaggat
gcattagataaaatcatggtggaccgcacgacggtggtagttgctcatcggctgtcgact
attaaaaatgcagatatgattgcagtggttaaaaatggtgtcattgtagagaaaggaaaa
catgatactttgataaatatcaaagatggtttctatgcttctttggttgcacttcatatg
agtgcttctacttcataa
DBGET
integrated database retrieval system
