Gossypium hirsutum (upland cotton): 107945993
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Entry
107945993 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107945993
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107945993
Endosome - Golgi transport
Tethering complex
GARP complex
107945993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG2_N
COG5_N
Tma16
Motif
Other DBs
NCBI-GeneID:
107945993
NCBI-ProteinID:
XP_016735667
UniProt:
A0A1U8N993
LinkDB
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Position
D12:43703942..43710795
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AA seq
779 aa
AA seq
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MGTEDVPLDDKAKRMRDLLSSFYSPDPSSTNDASSNHGSLDAIDTTSFDADQYMNLLKRK
SNLEALLQRHVEMAAEIKNIDTDLQMLVYENYNKFISATDAIKRMKSNIVGMETNMDHLL
DKIMSVQSKSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPVRLEKCIKSEAYADAV
KFYTGAMPIFKAYGDSSFQDCKQASEEAIAIMVKNLQGKLFSDSESIQARAEAAVLLKQL
DFPVDSLQAKLLEKLEQSLGDLELKPDEIENVSVESNDPKQGEVSDSIPIAAHEGSVLGF
AEAIRAYRVIFPDSEGQLTKLAQDLVVKHFETTQQYVKGRISSGSLLGVLRIIWTDVLLM
DEVLSEAVLPGFSLTAAQVALKQYVASTFSYLLRDISDALLRVNVSSKEAAEELPLQVAL
EASKKAVLQGSMDVLLDFRKLLDDDLGLLVELRDFIIDWVQEGFQDFFRALDDRFLLLSG
RKSSSSQDQDLTGAHGEKVLAGLVLVLAQLSVFIEQTAVPRITEEIAASFSGGGGRGYEN
GPAFVPGEICRIFRSAGEKLLLHYTKMRTQKVSTLLRKRFTTPNWVKHKEPREVHMFVDL
FLQELKEIGSEVRQILPQGLSRKHRRSDSNGSTASSRSNQLRDDKMTRSNTQRARSQLLE
THLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFL
RTPLKETVEDEAAIDFLLDEVVVAASERCLDPIPLEPPILDRLIQAKLAKWKEQNPVTP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggacggaagatgttcctttggacgacaaggcgaagagaatgagagatctgctgtcg
agcttctactctccagatccttcttcgacaaacgacgcttcttcaaaccacggcagctta
gacgctatcgacaccacttctttcgatgccgatcagtacatgaacctcctgaaacggaag
tcgaatttggaagcgcttcttcagaggcatgttgaaatggcagctgaaattaagaatatc
gataccgacttgcaaatgctggtttacgagaattacaacaagttcatcagtgccacggat
gcaattaaacggatgaaaagtaatattgtaggcatggaaacaaatatggatcatctgctt
gacaagataatgtcagtgcaatctaaaagtgatggggtcaacacttctctttttgaaaag
agagaacatatagagaagttgcaccggacacgtaatcttctgcgtaaagttcagttcatt
tatgatctgcccgttagacttgaaaagtgcatcaagtcagaagcatatgctgatgctgtc
aagttctacactggagcaatgccaatttttaaggcttatggagattcgtcatttcaggac
tgtaaacaagcatctgaagaagcgattgctataatggttaaaaacttgcagggaaagctg
ttttcagattctgaatccattcaagctagagctgaagctgcagtgcttttgaagcagttg
gattttccggtggatagcttacaggcaaaactgcttgaaaagttagagcaatctcttgga
gaccttgagcttaaaccagatgaaattgagaatgtttctgtggagtctaatgatcctaaa
cagggagaagtgtcagactcaattcctattgcagctcatgagggttctgtccttgggttt
gcggaggctatccgtgcttatcgagtcatatttcctgactcagaggggcagctaactaaa
cttgctcaagacttggttgtcaagcactttgaaactactcagcagtatgtcaagggacgg
atttcttctggcagtctcctgggtgttcttcggattatttggacagatgtgcttctaatg
gatgaagtgttaagtgaggctgttctacccggtttctctctgacggctgcccaagttgct
cttaaacagtatgttgccagcacgtttagttaccttctacgggacatatcagatgccctt
ctgagagtaaatgttagttcaaaagaggcagcagaggagctccccttgcaggttgctttg
gaagccagcaaaaaagctgtgctccagggcagcatggatgtcttactggatttccgcaaa
cttcttgatgatgacttagggctgctagttgaattgagagatttcataattgattgggtt
caagaaggatttcaggacttcttcagggctcttgatgatcgttttctcttactttcggga
agaaagagttcatccagtcaagatcaagatttaactggagcacacggcgaaaaagttctt
gctggtcttgtcctggtgttggctcaactttccgttttcattgaacaaactgctgtccca
agaataaccgaggaaatagctgcttccttttctggtggtggtggtcgaggctatgaaaat
ggacctgcttttgttcctggggagatatgtcgaatatttcggtcagctggtgaaaagctt
ttgcttcattatacaaaaatgagaactcagaaggtatctactctgctaagaaagcggttt
acaacaccaaactgggtcaagcacaaggagcctagagaagttcatatgttcgttgatttg
tttcttcaagagttgaaggaaataggaagtgaggtgaggcagattttacctcaagggctc
tcgcgtaagcaccggcgctctgacagcaatggaagcactgcctcatcccggagtaaccaa
ttacgagatgataaaatgactaggtcaaatacacagagagccaggagccagcttttagaa
acacatctagcaaaattgttcaaacaaaaagttgaaatttttacaaaagttgaatataca
caggagtccgttgtaacaactatagtaaaactttgcctcaaaagcttgcaagaatttgcc
agactccagacctttaatcgaagtggtttccagcaaattcaactggatattcaattctta
aggactcctttgaaggaaactgttgaagacgaagcggcgattgatttcttacttgacgag
gtggttgttgcagcatcagagcgttgtcttgacccgattcctctcgagcctccaattttg
gacagacttatacaagctaagttagcaaaatggaaggaacagaatccagttacaccctag
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