Gossypium hirsutum (upland cotton): 107946051
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Entry
107946051 CDS
T04793
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00520
Amino sugar and nucleotide sugar metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107946051
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107946051
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
107946051
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107946051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
zf-UDP
Xin
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
107946051
NCBI-ProteinID:
XP_016735721
UniProt:
A0A1U8N9E2
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All DBs
Position
D12:complement(44124607..44128846)
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AA seq
1175 aa
AA seq
DB search
MVLKTASSPSSSPVTITVSSSGGKETGSRSMGLTSPVPRASKSNNPSSPSPLGSRGNRRA
SSGGRYCSMSQDDPIPIEEINSEFVTYTVHIPPTPDHQSISTSQTSLNEEGKDGLKLKPE
RSFISGTIFTGGYNCVTRGHVIDGSLERPETLKSGLVCGMKGCDEKEIEGKCECGFKICG
DCYLDCVASGGGHCPGCKEPYKDVSDDDEDDEVRSDSEEDDQALPLPSMRESKLDKRLSL
VKSFKGPNHPPDFDHTRWLFETKGTYGYGNALWPKDGYGSGANGFENPPDFGERSKRPLT
RKVVVSTAILSPYRLLIILRLVALGFFLTWRIRHPNRDAMWLWGMSITCELWFAFSWLLD
QLPKLCPVNRITDLSVLKERFESPNLQNPKGRSDLPGIDVFVSTADPEKEPPLVTANTIL
SILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHNIEPRNPDAYFGQK
RDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKTQMKMG
GNLSDPIKVPKATWMSDGSHWPGTWASAEPDHSKGDHAGIIQAMLAPPNAEPVYGAEADG
ENLIDTREVDTRLPLLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHY
IYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVSMRALDGLQG
PMYVGTGCIFRRTALYGFSPPRATEHHGWFGRRKIKLLLRKPKVTKKAEDEIVLPINGEH
NDDDDDTDIESLLLPKRFGNSTSLVASIPVAEYQGRLLQDMQGMRNQGRPAGSLAVPREP
LDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDA
FRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFATRRMKFLQRVAYFNVGMYPFTSMF
LLVYCILPAVSLFSGQFIVQALSVTFLIFLLAITITLCLLAILEIKWSGITLHDWWRNEQ
FWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPDDEEDEFAELYVVKWSFLMIPP
ITIMMVNSIAIAVAVARTMYSPFPEWSKLLGGVFFSFWVLCHLYPFAKGLMGRRGKVPTI
VFVWSGLLSIIVSLLWVYINPPSGSKEDYMKFKFP
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaaaacggcctcttcaccgtcttcttctccggtgacgataacggtttcgtca
tcgggaggcaaagagactgggagtagaagcatggggttgacgagtccagttccacgggct
tcgaaatcaaacaacccaagttcacctagtccgctgggtagcagagggaatcgaagggct
tcaagtggaggaaggtattgctccatgtcgcaagacgatccaattccaatagaagagata
aactcagagtttgtaacgtatacggtgcatatcccaccaactcccgatcaccaatccatc
tcaacctcccaaacaagccttaacgaagaagggaaagatgggctgaagctgaaacccgag
aggagtttcatttcgggcactattttcacaggggggtacaattgcgttacccgtggtcac
gtcattgatggttccttggaaaggcccgagacgttgaaatcaggcctggtttgtgggatg
aaagggtgtgatgagaaggaaattgaaggcaaatgtgagtgtgggtttaagatttgtggg
gattgttacttggattgcgtggcaagtggtgggggtcattgtcctggatgtaaagagcct
tacaaggatgttagcgatgatgatgaagatgacgaggttaggtctgattctgaagaggat
gatcaggctttgcctttgccttcaatgcgcgagtccaagttggataaaagactttcactt
gtgaaatcgttcaaagggccgaatcatccaccggatttcgatcataccaggtggttgttt
gagactaaaggcacttacgggtatgggaatgctttatggcctaaagatggttatggatca
ggtgctaatggctttgagaaccccccagattttggagagagaagtaagaggcctttgact
aggaaagttgtagtttccactgcaattctcagtccatacaggctgcttattatactacgt
cttgttgccctgggtttctttctcacatggaggattaggcaccctaaccgtgatgcaatg
tggctatggggaatgtccataacgtgtgagctctggtttgccttttcgtggctcctagat
cagctccctaagctctgccctgtaaacagaataaccgacctctcagttcttaaagagcgt
ttcgagtctccgaaccttcaaaacccgaaaggacgatccgaccttccagggattgatgtc
ttcgtttccacggcagaccctgaaaaagaacctcctcttgtgactgcaaacaccatcctt
tcaatcctagctgttgactatccagtagaaaaagttgcttgttatctttcagatgatggt
ggagctcttctaacatttgaagctttggccgagacagccagctttgctagagtttgggtt
ccattttgccgtaaacataacatcgaaccccgaaatcccgatgcgtattttgggcaaaag
cgtgattttcttaagaacaaagtgaggcttgattttgttagggagaggagaagggtgaaa
agagagtatgatgaatttaaggtgaggattaactcattgcctgagtccattaggaggaga
tcagatgcttacaatgcccatgaagagcttcgagcaaaaaagacacaaatgaaaatggga
ggcaatctttcagaccctattaaagtccctaaggctacttggatgtctgatggttctcac
tggcctggcacttgggcttctgcagagcctgaccattcaaaaggagaccatgctgggatc
attcaggcaatgcttgctccaccgaatgcagagccagtttatggcgcagaagcagatggg
gagaacttgattgacacaagagaagtagatacaaggttgccattgttggtttatgtgtct
cgtgagaaacgtccaggttatgatcacaacaagaaggctggagcgatgaatgctttggtt
cgaaccagtgctatcatgtcaaatgggccattcatcctcaatcttgactgtgatcattac
atttacaattcattggctcttagggaaggaatgtgtttcatgcttgacagaggaggtgat
aggatttgttatgttcaattcccacaaaggtttgaagggatcgatcccaatgaccgatat
gcgaatcataataccgtgttctttgatgtgagcatgagggctcttgatggtttacagggt
ccaatgtatgtaggtacaggttgcattttcaggagaactgcactctatgggtttagtcct
cctagagctactgaacatcatggatggtttggtagaaggaaaatcaagttacttttgagg
aaacccaaggtgacaaagaaagcagaagatgagatagtattgcctattaatggggaacac
aatgatgatgatgatgatacagatattgagtctttgcttcttcctaaaagatttgggaac
tccacttctctggtagcgtcgatcccggtcgctgaataccaaggaaggttgctccaagat
atgcaaggaatgcgaaaccaaggcaggccagcaggttctcttgcagtgccgcgtgagcca
ttggatgctgcaacagttgcagaggccattagtgttatatcttgcttctatgaggataaa
actgagtggggaaaacgagtaggatggatatatggctctgtcacagaagatgtggtaacc
ggttatagaatgcacaaccgtggatggagatcagtgtactgtgtaaccaagagggacgcg
ttccgtgggactgcccctatcaatctaacagatcggctgcaccaagtacttcgttgggca
accggttctgtcgagatattcttttcgagaaacaatgcactgtttgctactcgacgaatg
aagttcttgcaaagagtagcatatttcaatgtgggaatgtaccctttcacttctatgttt
ctcctagtctactgcattctaccagctgtttctctattctcagggcagttcatagtgcaa
gctctcagtgtgaccttcttgatattcttgttggccatcacaatcaccttatgcctactt
gccatactcgaaatcaaatggtcaggtatcacacttcacgattggtggcgaaacgaacag
ttttggttgattggtggaaccagtgctcatcctgcagctgtgctacaaggacttctaaaa
gtcatagcaggagtcgacatctcattcaccttaacttccaaatccgccacccccgatgac
gaagaagatgagtttgcagagctatatgtcgtaaaatggagcttcctaatgatacctcca
atcacaatcatgatggtaaactcaatcgcgatcgcagtggctgttgcgagaaccatgtac
agcccattcccagagtggagcaagcttctcggaggggtgttctttagcttttgggtcctt
tgccatctctatccatttgcaaaaggattgatgggaagaagaggaaaagttccaaccatt
gtgtttgtatggtcaggcttgctctccatcatagtttcattgctttgggtatacatcaat
cctccatctggaagtaaggaggactacatgaagttcaaattcccttga
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