Gossypium hirsutum (upland cotton): 107946067
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Entry
107946067 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107946067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107946067
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107946067
Complex B
107946067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
xRRM
RRM_PARP14_3
DUF4523
DUF1866
Motif
Other DBs
NCBI-GeneID:
107946067
NCBI-ProteinID:
XP_016735743
UniProt:
A0A1U8NCR9
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All DBs
Position
D12:44422178..44424907
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AA seq
243 aa
AA seq
DB search
MAEISQADEIPPNMTLYINNLNEKIKIDQLKKSLHAVFSQFGKILDVLAFKTLKHKGQAW
VIFEDVSSATNALRRMQGFPFYDKEMRIQYAKTKSDIIAKADGTFVPREKRKRHEEKGGK
KRKEQLDPNQASAGLNPAYAGAYGATPPLSQLPYLGARPIVPEAPAPPNNILFVQNLPHD
ATTMMLQMLFNQYPGLKDVRTVETKPGIAFVEYENEMQSTVAMQALQGFKIQQNQMLITY
AKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggctgagattagtcaggcagacgaaattcctccaaatatgacactatacatcaacaat
ctcaacgagaagatcaaaatcgaccagttgaagaagtcattgcacgctgtgttttcacaa
ttcgggaagatactagatgtgttagcattcaagactttgaaacacaaaggtcaagcttgg
gttattttcgaggatgttagctccgctaccaatgctcttaggcgaatgcaaggctttccc
ttctatgacaaggaaatgagaatacaatatgcaaagactaaatcagatataatagcaaaa
gcagatggcacttttgtaccccgagagaagcggaagaggcatgaagaaaagggagggaaa
aaacggaaagagcaacttgatcctaatcaagcgtcagcaggtttgaatccagcttatgcg
ggtgcttatggtgcaacacctcctctatcacaattaccctacctgggtgctagaccaatt
gttccagaagctcctgcaccaccaaataacatcctgtttgttcagaatcttcctcatgat
gcaaccacaatgatgctgcaaatgctcttcaatcaataccccggtttaaaggatgtcaga
acggtggaaacaaaaccaggtatagcctttgtcgagtatgaaaatgagatgcaatcaacc
gtcgctatgcaggcactgcaaggtttcaagatacagcaaaaccagatgttgattacttac
gcgaagaagtag
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