Gossypium hirsutum (upland cotton): 107946188
Help
Entry
107946188 CDS
T04793
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107946188
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107946188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
107946188
NCBI-ProteinID:
XP_016735907
UniProt:
A0A1U8N9Y4
LinkDB
All DBs
Position
D12:complement(46450019..46452843)
Genome browser
AA seq
442 aa
AA seq
DB search
MPVSSSPPPILDSSLCRLLFLGSRDSSTMRKCLWLWGLLFIALGFAWSITAERNPRTERI
SGSAGDVLEDDPVGRLKVYVYELPSKYNKKILQKDPRCLSHMFAAEIFMHRFLLSSPVRT
LNPEEADWFYTPIYATCDLTPTGLPLPFKSPRMVRSAIQLISSSWPYWNRTEGADHFFVV
PHDFGACFHYQEEKAIERGILPILRRATLVQTFGQRNHVCLNEGSITIPPYAPPQKMQAR
QIPPDTPRSIFVYFRGLFYDVNNDPEGGYYARGARAAVWENFKSNPLFDISTEHPTTYYE
DMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDV
PKLDKILTSIPPHVILRKQRLLANPSMKRAMLFPQPTLPGDAFHQILNGLARKLPHPKSV
YLKPGEKILNWTAGPITDLKPW
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttcttcctctccacctcccatcttagacagctccctgtgtcgattgcttttt
ttgggttctcgagactcttccacaatgaggaaatgcttgtggttgtggggtttgcttttt
attgctttggggttcgcatggagcattaccgctgagcgcaatcctcgcactgaaagaatt
tctggaagtgcaggtgatgtgttggaagatgatccagttggaaggctgaaagtatatgta
tacgagcttccaagcaaatacaacaagaaaatccttcagaaagaccccagatgtctttca
catatgtttgctgctgagatcttcatgcacaggtttctcttgtcaagtcccgttcgaaca
ctcaatccagaggaagctgattggttttacacccctatatatgcaacttgtgatcttaca
cccactggcttgccattgcccttcaagtccccacggatggttagaagtgcaatacagctt
atttcgtcgagctggccttactggaatagaacagagggggctgatcatttctttgttgtg
ccccatgatttcggagcctgctttcactatcaggaagagaaagctatagagcgggggatc
cttccaatcctgcggcgtgctacgttagttcagacattcgggcaacgcaaccatgtgtgc
ttgaatgaaggttcaatcacaatacctccttacgctccccctcaaaagatgcaggcccgc
cagattccaccagatactccacgttctatttttgtctactttcgtgggttgttttatgac
gtgaataatgaccctgaaggtggctactatgcaagaggtgcaagggcagctgtttgggag
aattttaagagcaatccactgtttgacatctccactgagcatccaaccacctattatgag
gatatgcaacgagctatattctgcttgtgcccccttgggtgggcaccctggagccctaga
ctagtggaagctgtcgtgtttgggtgcattcctgtcatcatagcagatgatatagtttta
ccctttgctgatgctatcccctgggaggaaatcggagtttttgttgcagaagaagatgtt
cccaagttggataaaattctcacatctataccaccccatgtaatcttgaggaaacagagg
cttcttgcaaatccttcgatgaagcgagccatgttgtttccacaacctacactaccagga
gatgctttccatcaaatattgaatggccttgctcgtaaattgccacacccaaagagtgtt
tacttgaagcctggtgaaaagattctgaactggaccgcaggaccaatcactgacttgaaa
ccttggtga
DBGET
integrated database retrieval system
