Gossypium hirsutum (upland cotton): 107946302
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Entry
107946302 CDS
T04793
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107946302
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107946302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107946302
NCBI-ProteinID:
XP_016736053
UniProt:
A0A1U8NDK4
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Position
D12:complement(49003571..49009198)
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AA seq
590 aa
AA seq
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MATASSSSGPFFGIREENQSQTKQQQQQHTPTSSTGPVDPSPPPKKKRNQPGTPNPDAEV
VALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKKKVYLCPEP
TCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCD
CGTLFSRRDSFITHRAFCDALAQETARHPPPLNSIGTHLYGTSNYMGLGLSQVGTQISSI
QDPNNNQTAADILKLGGGGASRSSQFDHLLPPSMGSSSSSSFRPQQQAMGFVMEESNQIF
NQEHQSQHGLLGNSKPFQGLMQFPPDDDNNNNNNNASNASSAANLFNLSFLSNSGNNGCA
GDYNLTSSGLLMSDNFNNENGGNGGTNNASNLFSNNLMSDQMTSNIPSLFSSSVQNNNMV
PQMSATALLQKAAQMGSTSSNKNTNDDSLLRTFANSSSTGTKTSNFGAIFGDTAGNNLHE
LMNSIASGNSPIFGSGYDAVHGQESPYTNRSSMGQEQPPPPPPQSMNVSGGGSDRLTRDF
LGVGQIVRNMRGGAAQQRQGIGISRLSSERNSNITAPTSQQSFGERGNFQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcttcttcatcagggcctttcttcggaattagagaagagaatcaaagc
cagacgaaacaacaacaacaacaacatacaccaacttcatcaactggcccggttgatcca
tcgccgcctcccaagaaaaagagaaaccaacctggaactccaaatccagatgcagaagtg
gtagcactatctcccaagacattaatggctacaaacaggttcatatgcgaggtatgcaac
aaagggttccaaagggagcaaaatttacagctccatagaaggggacacaacttgccatgg
aagctaaagcagaaaacaacaaaagaagtgaagaagaaggtgtatctatgcccggagccc
acatgcgtccaccatgacccgtcgagggcacttggggaccttacgggcatcaaaaagcat
tactcgagaaaacatggtgagaagaaatggaagtgcgagaagtgttccaagaggtacgcc
gtgcaatctgattggaaagctcattctaagacctgtggcaccagagagtacagatgtgac
tgtggcactctcttctcaagacgtgacagctttatcactcacagagcattttgtgatgca
ctggctcaagaaactgcaaggcaccctcctcctttaaactccattggcacccatttgtac
ggaactagcaattatatgggcttagggttatctcaagttggaacccaaatttcatccatt
caagacccgaataataatcaaactgcggctgacatcctcaaacttggtggtggtggggct
tcaaggagttcccaatttgatcatcttcttcctccatcaatgggttcttcttcatcatca
tcgtttcgacctcaacaacaggccatgggtttcgtcatggaagaatctaatcagattttc
aaccaagaacatcaatcccagcatgggttgttgggaaacagcaaaccattccaaggatta
atgcagtttcctcccgacgacgacaacaacaacaacaacaacaacgcaagcaacgcttct
tcggctgccaatctcttcaaccttagcttcctttccaacagtggcaacaatggttgtgct
ggcgattataatttaacatcttcgggtttgctcatgtctgataatttcaacaatgaaaac
ggcggcaatggtgggaccaacaacgcctccaacctcttctccaacaacttaatgagtgat
caaatgacttccaacatcccttctctcttcagctcatcggttcaaaacaataacatggtg
ccccaaatgtcagccaccgcattgcttcaaaaggctgctcaaatgggctctacttcaagc
aacaaaaacaccaacgacgattcccttctaagaacctttgcaaactcttcttcaaccgga
accaaaacctccaacttcggcgccattttcggagatacggctggcaacaatctacatgaa
ctaatgaactccattgccagtggaaattcccccattttcggaagtggctatgacgctgta
catggtcaagaaagcccttacacaaatagaagtagcatgggacaagaacaaccaccgccg
ccgccgccgcaaagtatgaatgttagcggtggcgggtcggatagattgactcgggacttc
cttggggttgggcaaatagttagaaacatgaggggaggagcggcacaacaacgacaagga
attgggataagcaggctgagttcagagagaaatagtaacataacggcgccgacaagccag
caatctttcggagaacgtgggaatttccagtga
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