Gossypium hirsutum (upland cotton): 107946399
Help
Entry
107946399 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107946399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107946399
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107946399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
ETRAMP
RGCC
RIFIN
PLU-1
Fusion_gly
Cation_ATPase_C
Pox_EPC_I2-L1
SNARE
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
107946399
NCBI-ProteinID:
XP_016736193
UniProt:
A0A1U8NDZ1
LinkDB
All DBs
Position
D12:50440914..50443442
Genome browser
AA seq
219 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKCNSASAITDSEQKKQKFSEINSGIDEADVLIRKMDLEA
RSLQPGVKASLLAKLREYKADLNKLKKEFKRISSPNAHDELLESGIADIHSVSAEQRDRL
SMSVERLNQSSERIKESRRTVLETEELGISILEDLHQQRQTLLHAHNKLYDVDSAIDKSK
KVLTTMSRRITKNKWIVISIIVALVLAIILILYYKISHG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggttttcgaaggttatgaacgacagtactgcgaactctctgccaatctttcc
cgaaaatgcaattctgcttctgctattacagattcagaacagaagaaacagaagttttcg
gagatcaattctgggatcgatgaggctgatgtcctgattcggaaaatggacctggaagcg
aggagtttgcaaccaggggttaaggcttcacttcttgctaaattaagggaatacaaagct
gatctgaacaaattgaagaaggaattcaagagaatttcttcacccaatgctcatgatgag
ttgttagaatcagggattgctgatatacactcggtttctgctgagcaaagggatcgattg
tcaatgtcagtggagagactaaatcagtcaagtgagagaattaaggagagtagaagaact
gttctggaaacagaagagctcggtatttcaatacttgaagatttgcatcaacagcgacaa
actcttttacatgcccataacaagctttatgatgtggatagcgccattgacaagagcaag
aaagttttaacaaccatgtcgagaaggattaccaagaacaaatggatcgttatctcgata
atcgtagcacttgtccttgcaatcatcttaatcctgtattacaagatttcacatggctga
DBGET
integrated database retrieval system
