Gossypium hirsutum (upland cotton): 107946402
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Entry
107946402 CDS
T04793
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107946402
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
107946402
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107946402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
107946402
NCBI-ProteinID:
XP_040962929
LinkDB
All DBs
Position
D12:50463283..50468018
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AA seq
503 aa
AA seq
DB search
MEVRSENNIQVRCDKIPCQLIPRTRLQVWFFRVCSSILLWTCLIQLLAVCELWHPRLLTG
LTNRIPWTSRPPLRLQHSLHSPPPLPPPRNYRSNGFLKVSCNGGLNQMRAAICDMVIVAR
LLNLTLVVPELDKTSFWADPSDFGDIFDVSHFIDSLRDEVRIIKRLPKKFSRKYGFQAFR
MSPVSWSNEKYYLEQILPLFSKHKVVHFNRTDTRLANNGIQLDLQKLRCRVNFQGLKFTP
EIETLGYKLVRILQDKGPFVALHLRYEMDMLAFSGCTHGCTVEEAEELKRLRYAYPWWRE
KEIMSEERRQQGLCPLTPEEATLVLQALGFDKDTQIYIASGEIFGSERRLASLRAAFPHI
VKKETILDPAELPQFQNHSSQMAALDFMVSVASNTFIPTYYGNMAKVVEGHRRYLGFKRS
ILPDRKKLVELLDLHQNGTLPWNDFALAVRQVHEKRMGQPFRRRIIPDKPKEEDYFYANP
EECLCEGTKCEDLVGPSNSSTLH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggttagatcagagaataatatacaagtgaggtgcgacaagattccttgtcaactg
attcctaggactcgtcttcaggtctggttctttagagtttgttccagcattttgctttgg
acttgtttgattcagctccttgccgtctgtgagttatggcacccgcgtttgcttactggt
ttaaccaatcggattccctggacctctcgccctcctcttcgtcttcaacactcgctccat
tccccgcctcctcttcctccccccagaaactatagaagtaatggttttctcaaagtttca
tgcaatgggggcttgaatcaaatgcgtgctgcgatctgtgacatggtaatcgttgctcga
cttttaaatctcactttggttgttccagaacttgataagacatcattctgggcggaccct
agtgattttggtgacatttttgatgtgagccatttcattgattctctaagggatgaagtt
cggattatcaaaaggctgccaaagaagtttagtaggaaatatgggtttcaagcttttcgg
atgtctcctgttagctggtcaaatgaaaagtactacttagaacagattcttcccctgttc
agtaagcataaggtagtgcacttcaatcgaactgatacacgactggcaaataatgggatt
caacttgatcttcagaaacttaggtgccgtgtgaatttccaaggactgaaatttactcct
gagattgagacattggggtacaaattggttcgcatacttcaagataagggacccttcgtg
gcattgcatctaagatatgagatggacatgttggctttctcaggttgcacgcatggctgc
accgttgaagaagctgaggagctaaaacgattgaggtatgcatacccttggtggagagag
aaagagataatgtctgaagagaggagacaacaagggttgtgtcctctgacacccgaagaa
gcgacgctagttttgcaagcattaggtttcgataaggacactcagatttacatcgcttct
ggtgagatttttggcagtgaacggagattggcatcgctaagagctgcatttccacacatt
gttaaaaaggaaacaatattagatcctgcagaactgccgcaatttcagaaccattcatct
cagatggcggctttggactttatggtatcggttgccagcaatacattcattccaacatat
tatgggaacatggcaaaagttgtagaaggtcatcgcaggtatcttgggtttaaaagaagt
atcctgcctgatcgaaagaaactcgttgaattgctggatttgcatcagaacgggacactt
ccttggaatgattttgcactggccgtaaggcaagtgcatgagaaacggatgggacaaccc
ttccgtcgtcggataattccagacaaaccaaaggaggaagattatttctatgcaaaccct
gaagagtgcctttgtgagggaacaaagtgtgaagatttggtaggccctagtaactcaagt
acactacattaa
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