Gossypium hirsutum (upland cotton): 107946506
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Entry
107946506 CDS
T04793
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107946506
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
107946506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
TIP120
Motif
Other DBs
NCBI-GeneID:
107946506
NCBI-ProteinID:
XP_016736359
UniProt:
A0A1U8NET3
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All DBs
Position
D12:52594369..52598754
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AA seq
796 aa
AA seq
DB search
MDSLQSLPPLSTLSTSVSSALNAKLGTNHDLTQAPSIVAEFLTQCDDLERNLVHLNRTLE
SNLASYASFSNRIGHLFGIVNSKLTDLGSSVCLRSSVSDGEGLGEELPSLAKEVARVEAV
RAYAEVASKLDNLIGDIEDAVSSTMNKNLRKDSSAQNSEETRMVAIKTLKVTEDLLTSVT
KARPQWARLVSAVDHRVDRALAILRPQAIADHRALLTSFGWPPSLSNLTSSSLDARKSSE
VPNPLFTMHGDLKRRYCENFFALCRLQELQRQRKSRQLEGHNREVALHQPLWAIEELVIP
VSVACQRHFSKWIDKPEFIFALVYKITRDYVDSMDELLQPLVDEAMLTGYSCKEEWISAM
VTSLSTYLAKEIFPIYIGQLEEESVTGIRSQARTSWLHLIDLMVSFDNRIKPLVEQSGIL
LSLLEDGTPRKISSLSVFCDRPDWLDMWAEIELDDAMEKLKPEIDEERNWTKKVQGADLS
NSDDYKSPAVSSITFTCLSSLIERCRLLPTVSLRSRFLRLTSTPVIKFFLDCLLLRCQEA
EGLTALTDDDALIKVSNSVNAAHYSESILKEWCEDVFFLEMGLDQGEHPGESVAENSGSK
VPIEEYGNGIFHEEIVKFEDFRTQWVEKITMVILRGFDARCRDYIKNRRQWQEKSEEGWT
VSQTLIGALDYLQAKMAVIEENLNRVDFAGIWRSLAAGVDKLIFNGILMSNVKFHEEGVE
RFGYDVEVVWGVFRAWCLRPEGFFPKVSESLKLLKMEKDQLEDSLKEGQKRMKENGIRHL
SVAEVEKIGKNRVYTK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggactctctgcaaagtctccctccactatcgactctgtccacctcagtttcctccgcc
ctcaacgctaaactcggcaccaaccatgatctaacccaagcaccaagtatcgtcgccgag
tttctgactcagtgcgatgatctggaacgaaatctagtccacctcaaccgcaccctcgag
tcaaacctcgcatcttacgcttccttctctaatcgcatcggccacctcttcggcattgta
aattcgaaattgaccgatctaggatcctccgtttgccttcggtcctccgtttcagacgga
gaaggtttgggagaggagttgccgtcgttggccaaggaggtggccagagtggaagcggtc
cgagcatatgcagaggtagcatcaaagctggataatttaatcggtgatattgaagatgct
gtctcttctactatgaacaaaaatttaagaaaggattcttccgcgcaaaattcagaagag
acccgcatggttgctattaaaacactcaaagtgaccgaagacttgttaacttcagtcacg
aaggcacggcctcaatgggcacgtctagtctcagctgttgatcacagagtagatcgagct
ctagcaatattaagaccccaggcaattgctgatcaccgagcccttctcacatcctttgga
tggccaccatcactttcaaacttgacttcctcaagtctggatgcaaggaaatcaagtgaa
gtcccaaatcctcttttcacaatgcatggtgatctcaaacgtcggtattgtgaaaacttt
tttgccctgtgccgcctgcaggagttgcagagacaaagaaaatcacggcaacttgagggc
cataatcgggaggtcgctcttcaccaaccactttgggcaattgaagagcttgtcattcct
gtatctgttgcgtgccaacgccacttttcaaagtggattgataaaccagaattcattttt
gctctggtatataaaattacacgggattatgttgattcaatggatgagttattgcagcca
ttggttgacgaggcaatgctaactggttacagttgcaaagaagaatggatttctgcaatg
gtaacatccttatcaacatacttggcgaaagagatattccctatttatattggtcaactg
gaggaagagagtgtgactggtattagatcacaggctaggacatcttggctccatcttatt
gacttgatggtctcttttgacaaccggataaagcctcttgtagaacaatctgggatcttg
ctttccctcctggaagatgggactccgcgtaagatttcatctctgtctgtgttctgtgat
cgacctgactggcttgatatgtgggcagaaatagagctagatgatgcaatggaaaaacta
aaaccggagatagatgaagaaagaaactggactaagaaggttcagggggcagatctctct
aattctgatgactataaatcccctgcagtttccagcattacttttacgtgtttatcatct
ttgattgagcggtgtcgattgttgcctacagtttctctgaggtcaaggtttctgagatta
actagtacaccggtcataaaattttttttggattgcttacttctcagatgccaagaagct
gaaggattgactgccttaactgatgatgatgctctaatcaaagtttcaaactctgtcaat
gcagctcactattccgaatctattttaaaagaatggtgtgaggatgtctttttccttgag
atgggattggatcaaggtgagcatcctggagagtctgttgctgaaaatagtggtagcaag
gttccaattgaagagtatggaaatggtattttccatgaggagattgtgaagtttgaagat
ttcagaacacagtgggttgagaagataactatggttattttaagaggatttgatgcccgc
tgccgagattacataaagaacagaagacaatggcaggaaaagagtgaagaaggttggact
gtatcacaaacattgataggggccctggattatttgcaggcgaaaatggcagtaatagaa
gaaaatttaaacagggtagactttgcgggaatctggaggagcctggcagcgggggtggat
aaattgatatttaacggcattcttatgagcaatgtgaagttccatgaggagggggtggag
agatttgggtatgatgtagaggtggtatggggggtatttagggcatggtgtttgaggccg
gaaggattctttccgaaggtgagcgagagcttgaagttgttgaagatggaaaaggaccaa
cttgaagacagcctgaaagaggggcagaaacggatgaaggagaatggaattaggcatttg
agtgtagctgaggtagaaaagattgggaaaaacagagtatataccaagtaa
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