Gossypium hirsutum (upland cotton): 107946509
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Entry
107946509 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107946509
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107946509
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107946509
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
107946509
NCBI-ProteinID:
XP_016736369
UniProt:
A0A1U8NEW6
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Position
A08:complement(52139604..52146079)
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AA seq
710 aa
AA seq
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MTDYFAYMMSSRFQDWNSGRSTEGRFSDNNWINSGKIRFTINSFSEKLQRGVESGSERFK
GIRRSFKSCSFNRGFGSSKKVLDPQGPFLQRWNKIFLLSCIIAVSIDPLFFYVPVINDDK
KCLVLDEKMEITASVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDLLAIAKRY
LKSYFVIDVLAVLPLPQVVILIIIPQMRGLKSLNTKNLLTFIVLFQYLPRVFRIYPLYKE
ITRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIEREYTCWKDACRNNTKCNPRS
FYCDGDSSFSMFLHQSCPIQTPNTTLFNFGIFLNALQSGVVESENFPEKFFYCFWWGLQN
LSSLGQNLETSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAE
QWMSHRLLPENLRERIRRYEQYKWQETRGVDEENLLCNLPKDLRRDIKRHLCLALLMRVP
MFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFN
SEYIGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALVADDLKFVASQFRRL
HSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEEDRLQDALANASGSSPS
LGATIYASRFAANALRALRRNRSRKTRVLERVPPMLLQKPAEPDFTAEEQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgactgattacttcgcgtacatgatgtcttccaggttccaggactggaattcagggcga
agcactgaaggacgtttttctgataataattggataaattcggggaaaattagattcaca
ataaattccttttcagaaaagttacaaagaggggttgaatctggttctgaaaggtttaaa
gggattagaagatcatttaaatcttgttcttttaaccgtgggtttgggtctagtaagaaa
gttcttgatccacaggggccgtttcttcaaaggtggaacaagatatttttattatcttgt
atcatagcagtctcaattgatcctttattcttttatgtcccagtgataaatgatgataag
aagtgccttgttttggacgaaaagatggagatcacagccagtgtgctgcgctcattcaca
gatatcttttatataatccatattatttttcaatttcgtactgggttcattgcgccttct
tctcgtgtatttggaagaggcgttttagttgaagatttattggcaatagcaaagaggtat
ctgaaatcatactttgtaatcgatgttctagcagttcttccccttccacaggtggtgatt
ttaattatcataccccaaatgagagggttgaagtcattgaatacaaagaacttgttgaca
tttattgttctcttccaatatcttccaagagtttttcgaatatatccactgtataaggaa
attacaaggacttctggcatactaactgaaactgcatgggctggagctgcgttcaatctt
tttctttacatgctagcaagccatgtttttggggctttttggtacttgttttctattgaa
agggaatacacatgctggaaagacgcctgtaggaataatactaaatgtaacccccgttca
ttttactgtgatggtgattcttcttttagcatgtttctacatcagtcatgccctatacaa
acacccaacacgactcttttcaattttgggattttcctcaatgcccttcaatctggtgtt
gtggagtcagaaaattttccagagaaattcttttactgtttctggtggggcctgcagaat
ctaagttctctgggtcagaacctggaaactagtacctatgtctttgaaatctgctttgca
gttttcatttcaatctcgggcttggttctgttttcatttctcattggaaatatgcagaca
tatttgcagtccacaactaccaggttggaggagatgagagtaaaaaggcgtgatgcagaa
caatggatgtcccatcgcttactacctgagaatctgagggaacgaattaggcgatatgaa
caatacaaatggcaagaaactagaggagttgatgaagagaatttactttgtaatctcccc
aaggacctacgaagggatataaagcgccatctttgcttggctctgctcatgagagtgcca
atgtttgaaaaaatggacgagcaattactggatgctatgtgtgatcgtctcaagccggtt
ctctacacagaggagagctatattgttcgggagggagacccagttgatgagatgctcttc
atcatgaggggcaaattgttgaccatgacaaccaatggtggaagaactggcttctttaat
tctgaatacattggggcaggggatttttgtggagaggaacttctcacctgggcactggat
ccccattcttcgtcaaacctccctatctcaactagaactgtccgagctcttacagaagtt
gaagcttttgctctggtggctgatgacttgaagttcgttgcttctcaattccgccggctt
cacagtaagcagctgcgccacacttttaggttttattcacagcagtggaggacttgggca
gcttgttttatacaagctgcttggcgccgctacagcaaaaagaaacttgaagaatctctt
agagaagaggaggacagattgcaagatgctttagccaatgcgagtgggagttcaccaagt
ctgggtgcaaccatttatgcctcacggtttgctgccaatgcactacgtgctttacggcga
aaccgtagccgtaaaacaagagtgctggagagggttccacctatgctacttcagaagcct
gcagagcctgattttactgctgaagaacaatag
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