KEGG   Gossypium hirsutum (upland cotton): 107946628
Entry
107946628         CDS       T04793                                 
Name
(RefSeq) calnexin homolog
  KO
K08054  calnexin
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
ghi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107946628
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107946628
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107946628
   04131 Membrane trafficking [BR:ghi04131]
    107946628
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ghi04091]
    107946628
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   107946628
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    107946628
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    107946628
Lectins [BR:ghi04091]
 L-type lectins
  107946628
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 107946628
NCBI-ProteinID: XP_016736527
UniProt: A0A1U8NBY0
LinkDB
Position
D12:55107406..55110654
AA seq 539 aa
MMMGLLALLLLLAFASLQLFCFADDDNNDDDVVFYESFEESFEGRWIVSNKDDYKGLWKH
SKSEGHEDYGLLVSEKARKYAIVKVVDEPVSLKDGTTVLQFETRLQSGIECGGAYIKFLR
PQEAGWKPEEFDNKSPYSIMFGPDKCGTTNKVHFIFKHKNPKNGEYVEHHLKYPPSVPSD
KLTHVYTATLKLDKEVKIMIDGEEKKKANFLAAEDFDPPLIPAKTIPDPDDKKPEDWDDK
EKIPDPNAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGVW
EPPKMYNPKCAIAPGCGEWKRPMKSNPAYKGKWSPPLIDNPNYKGVWKAREIPNPNYFEL
DKPDFEPIAAIGIEIWTMQEGILFDNILIAKNEKVAKSYRETKWKPKFEVEKERQQAEEE
ASGLDFLASIKRKVFNALYQIADIPFLSNYKPQILDHIKKAEKQPNLTMGVLVSTVAIIL
TIFLKLIFGGKNQQCPRIETKPVPVVAETSDDQGSDGEKVEKAEKNEAAAAARRRRRET
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgatgatggggcttttagctcttcttcttctcttagcttttgcgtcactgcagctcttt
tgcttcgccgatgatgataataatgacgatgatgtggttttttatgaatcatttgaagag
tcatttgagggtcgatggatcgtctctaataaagatgattataaaggtttatggaagcat
tcaaagagcgagggccacgaagactatggtcttctggtgagtgagaaggcaagaaagtat
gcaatagtgaaggtggttgatgaaccggtgagtctgaaagatggaaccaccgtgcttcag
ttcgagactcggctccagagtggaatcgaatgtggtggtgcctacattaaatttcttcgt
cctcaagaggcgggttggaagcctgaggaattcgacaataaatccccttactccatcatg
tttggacctgacaaatgtgggacaacaaacaaggtgcatttcatatttaagcataagaat
cccaagaatggggaatatgttgaacaccatcttaaatacccaccttctgtcccatccgac
aagctcactcatgtctacactgcaaccttgaaactcgacaaagaggttaaaattatgatt
gatggagaggagaagaagaaggcaaacttcttagcagccgaagattttgatcctccactt
atcccagccaagacaatccctgatcctgatgataagaaaccagaggattgggatgacaaa
gaaaagattcctgatccaaatgctgtgaaaccggatgattgggacgaggatgcaccgatg
gaaatcgaggacgaggaggcggtgaaaccagaaggatggttagacgatgagcctgaggag
atagatgaccctgaggcaaccaagccagaagattgggatgatgaagaggatggggtgtgg
gaacccccaaagatgtataacccaaagtgtgcaatagctcctggttgcggtgaatggaag
aggccaatgaagagtaatcctgcttacaaagggaaatggtctcctccactaattgataac
cccaattataagggtgtttggaaggctagggagattccaaaccccaactactttgagctt
gacaagcctgactttgagcctattgctgccattggtattgagatttggacaatgcaagaa
ggaatactgtttgataatatattgatagctaaaaacgagaaggttgccaagtcatatcga
gagaccaagtggaaacccaagtttgaggttgagaaagaaagacagcaggctgaggaagaa
gcttctggtttagacttccttgcaagcatcaagaggaaggtgtttaatgccctataccag
attgctgatattcctttcttaagcaactacaagcctcaaattctcgatcacattaagaag
gctgagaaacaaccaaacctcaccatgggagtcctagtctctactgtcgccattatcctc
acgattttcttgaagctcatttttggtggcaagaatcagcaatgcccaagaatagaaacg
aaaccagtacccgtggtcgctgaaacatcagatgatcaaggaagcgatggagaaaaggtt
gaaaaggcagagaaaaatgaagctgctgctgctgcacgacgaaggaggcgtgaaacataa

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