Gossypium hirsutum (upland cotton): 107946628
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Entry
107946628 CDS
T04793
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107946628
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107946628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107946628
04131 Membrane trafficking [BR:
ghi04131
]
107946628
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
107946628
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
107946628
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
107946628
Autophagy
ER-phagy
Other ER-phagy associated proteins
107946628
Lectins [BR:
ghi04091
]
L-type lectins
107946628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
107946628
NCBI-ProteinID:
XP_016736527
UniProt:
A0A1U8NBY0
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Position
D12:55107406..55110654
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AA seq
539 aa
AA seq
DB search
MMMGLLALLLLLAFASLQLFCFADDDNNDDDVVFYESFEESFEGRWIVSNKDDYKGLWKH
SKSEGHEDYGLLVSEKARKYAIVKVVDEPVSLKDGTTVLQFETRLQSGIECGGAYIKFLR
PQEAGWKPEEFDNKSPYSIMFGPDKCGTTNKVHFIFKHKNPKNGEYVEHHLKYPPSVPSD
KLTHVYTATLKLDKEVKIMIDGEEKKKANFLAAEDFDPPLIPAKTIPDPDDKKPEDWDDK
EKIPDPNAVKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGVW
EPPKMYNPKCAIAPGCGEWKRPMKSNPAYKGKWSPPLIDNPNYKGVWKAREIPNPNYFEL
DKPDFEPIAAIGIEIWTMQEGILFDNILIAKNEKVAKSYRETKWKPKFEVEKERQQAEEE
ASGLDFLASIKRKVFNALYQIADIPFLSNYKPQILDHIKKAEKQPNLTMGVLVSTVAIIL
TIFLKLIFGGKNQQCPRIETKPVPVVAETSDDQGSDGEKVEKAEKNEAAAAARRRRRET
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggggcttttagctcttcttcttctcttagcttttgcgtcactgcagctcttt
tgcttcgccgatgatgataataatgacgatgatgtggttttttatgaatcatttgaagag
tcatttgagggtcgatggatcgtctctaataaagatgattataaaggtttatggaagcat
tcaaagagcgagggccacgaagactatggtcttctggtgagtgagaaggcaagaaagtat
gcaatagtgaaggtggttgatgaaccggtgagtctgaaagatggaaccaccgtgcttcag
ttcgagactcggctccagagtggaatcgaatgtggtggtgcctacattaaatttcttcgt
cctcaagaggcgggttggaagcctgaggaattcgacaataaatccccttactccatcatg
tttggacctgacaaatgtgggacaacaaacaaggtgcatttcatatttaagcataagaat
cccaagaatggggaatatgttgaacaccatcttaaatacccaccttctgtcccatccgac
aagctcactcatgtctacactgcaaccttgaaactcgacaaagaggttaaaattatgatt
gatggagaggagaagaagaaggcaaacttcttagcagccgaagattttgatcctccactt
atcccagccaagacaatccctgatcctgatgataagaaaccagaggattgggatgacaaa
gaaaagattcctgatccaaatgctgtgaaaccggatgattgggacgaggatgcaccgatg
gaaatcgaggacgaggaggcggtgaaaccagaaggatggttagacgatgagcctgaggag
atagatgaccctgaggcaaccaagccagaagattgggatgatgaagaggatggggtgtgg
gaacccccaaagatgtataacccaaagtgtgcaatagctcctggttgcggtgaatggaag
aggccaatgaagagtaatcctgcttacaaagggaaatggtctcctccactaattgataac
cccaattataagggtgtttggaaggctagggagattccaaaccccaactactttgagctt
gacaagcctgactttgagcctattgctgccattggtattgagatttggacaatgcaagaa
ggaatactgtttgataatatattgatagctaaaaacgagaaggttgccaagtcatatcga
gagaccaagtggaaacccaagtttgaggttgagaaagaaagacagcaggctgaggaagaa
gcttctggtttagacttccttgcaagcatcaagaggaaggtgtttaatgccctataccag
attgctgatattcctttcttaagcaactacaagcctcaaattctcgatcacattaagaag
gctgagaaacaaccaaacctcaccatgggagtcctagtctctactgtcgccattatcctc
acgattttcttgaagctcatttttggtggcaagaatcagcaatgcccaagaatagaaacg
aaaccagtacccgtggtcgctgaaacatcagatgatcaaggaagcgatggagaaaaggtt
gaaaaggcagagaaaaatgaagctgctgctgctgcacgacgaaggaggcgtgaaacataa
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