Gossypium hirsutum (upland cotton): 107946655
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Entry
107946655 CDS
T04793
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107946655
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_R13L1-DRL21
NACHT
LRR_4
AAA_22
AAA_14
NPHP3_N
LRR_8
AAA_16
LRR_RPS2
LRR_At5g56370
nSTAND3
LRR_Zer-1
AAA_25
ATPase_2
AAA_33
IL2
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
107946655
NCBI-ProteinID:
XP_040963222
LinkDB
All DBs
Position
D12:56203999..56207287
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AA seq
934 aa
AA seq
DB search
MAEIAVSFLLEKLTTFLQNEVELLQGIPEDLQYIKDELQSLKAVLRVADSVGESNQELKV
WVQQVREIAYDAEDTLDEYKLDVVNDHRHGLDAFLQQVCCFTKNLKAQHRIASKINGIKS
RISNVSARRPNFDNNGTSEQGPSSIATVNPWIDRRGDALLLDSVDLVGIDNSKEQLVQWL
VEGNSGRKVVSVVGMGGSGKTTLAKQVYDNTKVKKHFAVHVWITISHPLKIEELLRNMVR
QLFDSIRKPVPQGVDDMDSFLLKMIIKGFLQQRRYLIVLDDVWHMNEWEMLDHALANNGR
GSCVLLTTRNSEVASTSCIESEDKIFNLEPLSPDESWTLFCKKCFQKNSCPAELERHSRR
ILDKCEGLPLAIVAISGVLATKRRTVAEWETVYRSLGAEIEDNSRLINFKEVLLLSFNDL
PYHLKSCFLYLSLFPGNHLIENMRLIRLWIAEGFVEAKEGKTQEEVAEDYLNELLNRSMI
QIAGMTNDGRVKACRIHDLLREIIISNARDQNFVAVAKEQNATWPEKVRRLAIHNALANA
QRNMNASHLRSFFVFDTGDPLSSSPTDTLIPNSCRLLKVLDLRAAPIENFPEEISNLRLL
RYLSLRDTKITTIPSSIKKLQDLETLDLKHSQVSELPVEILKLRKLHHLLVYHYEFTSYS
RFHSKYGFQALSGIGALQSLQKLCFMDVNHDNALIMELGKLVQLRRLGITNMRKEDGKIL
CSSIEKLINLHALSIVSSVKEEVIDLQCLSSPPQLLQRLYLYGRLEKLPEWIPCLESLAV
IYLKWSRLPNDALESLQNLPNLVHLELLQAVEGDTLHFKAGGFKELKLLGIDKFEGLRCI
QVEDGAMPCLEKLSIQRCKLLERVPLGIQHLTKLKVLEFFDMPEELIMTLGPDANIPEVY
YTYWRNGEWEVYSLEGSAENGRSISTESLQSRFK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaattgcagtatcatttcttcttgaaaagctcacaacttttctgcaaaatgag
gtggagcttttacaagggatccctgaagatttacagtacatcaaggacgagttgcagagc
ttgaaagctgtcctgagagtggctgactcggtgggggagagtaaccaagaactcaaggta
tgggttcagcaagtgagagagattgcttacgacgctgaagataccctggatgaatacaag
cttgacgttgtcaatgaccataggcatgggcttgatgcttttctacagcaagtttgctgc
tttacgaaaaacttgaaagcccaacatcggattgcttccaagataaacggcatcaaatcc
agaatcagcaacgtatctgccaggcgtccgaactttgacaacaatgggactagtgagcaa
ggtccaagctccattgccacagtgaatccatggatagacagaagaggggatgccctcctt
ctcgatagcgttgacttagttggtattgacaactccaaagagcagctcgtgcaatggttg
gtcgagggaaactccggccgcaaggtggtttctgtggtcggaatgggtggctccggaaaa
accaccttggccaagcaagtttatgacaacaccaaagtgaagaaacatttcgccgtacat
gtttggatcaccatttctcatcctctcaagatagaggagctcctaagaaacatggtacgg
caactgtttgattcgatcaggaagccagttcctcaaggtgtcgatgacatggattcgttt
ctcctgaaaatgataatcaagggtttccttcagcaaaggaggtacttgattgttttagat
gatgtttggcatatgaatgaatgggaaatgctcgatcacgcattagctaacaatggccgt
ggtagctgtgtgttgcttacaacgcgtaactctgaggtagcttcgacgtcgtgcatagaa
tctgaagataagatattcaacttagagcccttgtctccggacgagtcatggactcttttc
tgtaagaaatgtttccaaaagaactcatgtcctgctgaattggagagacattctagacgt
attttggacaagtgtgaggggctgccccttgcaattgtggccattagtggtgttttggct
acgaaaaggcgtacagttgcggaatgggagacggtttatcgtagccttggtgctgaaatt
gaggacaacagcaggctcatcaacttcaaagaagtgcttttgctgagcttcaatgatttg
ccataccacttgaaatcttgtttcttgtatttaagcctcttccctgggaaccatctgatt
gagaatatgagactgattcgactgtggattgctgaagggtttgtcgaagccaaagaagga
aagacacaagaagaagttgcagaggactaccttaatgaactcctcaatagaagcatgatc
cagatagccgggatgacgaacgatggaagggtcaaagcatgccgcattcatgaccttctg
cgagaaatcatcatttcaaatgctagggaccagaacttcgttgcagttgctaaagaacaa
aatgcaacatggcctgaaaaggttcggcgcctcgcaatacataacgcattggcaaatgca
caacggaatatgaatgcttctcatctacggtctttttttgtgtttgatacgggtgatccg
ctctcctcttcaccaacagatacattgattcctaatagttgcaggctgcttaaggtgttg
gatttgcgagctgcgcctatagagaattttccagaggaaattagcaacttgagactgtta
aggtatcttagcttgagagataccaaaatcacgacaattccgagctctataaagaagctt
caggacttggagacattggaccttaaacactcccaagtttcggaattgccagttgagatc
ctaaagctccgaaaacttcatcatcttctggtataccattatgagttcacctcgtattca
cgttttcactccaaatacggttttcaggccttgtcaggtataggagctctacaatccctt
caaaagctttgttttatggatgtaaaccatgataacgcacttatcatggagctgggaaaa
ctggtgcaacttcgaagactaggcattacaaacatgagaaaagaagatggaaagattttg
tgctcgtccatcgaaaagctgatcaaccttcatgcattgtcaattgtttcatcggttaag
gaagaggtcattgatctgcaatgtctttcttctcctcctcaactacttcaaaggttatac
ctgtatgggcgattagagaagttaccagagtggataccttgtctcgaaagcctggcagtg
atatatctaaaatggagtaggctgccaaatgatgcacttgaatctcttcaaaacttgccc
aaccttgtacatcttgaattgctgcaagctgtggaaggagacactttacattttaaggct
ggcggtttcaaggagcttaaacttctgggtatagacaaatttgaagggctgagatgcata
caagtagaagatggagcaatgccttgtcttgaaaagctgagcatccaacgttgtaaattg
ctggagagggtgccattagggattcaacatctgaccaagttaaaagtactcgagtttttc
gatatgcccgaggaattgattatgacccttggtcctgatgcaaacattccagaagtttat
tatacttactggaggaatggagaatgggaggtctattctctagagggttcagccgagaat
gggaggtccattagcactgaatcgcttcaaagtcgttttaaatga
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