Gossypium hirsutum (upland cotton): 107946793
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Entry
107946793 CDS
T04793
Name
(RefSeq) ABC transporter B family member 28 isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107946793
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107946793
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
107946793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA
AAA_22
AAA_29
AAA_16
AAA_5
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_30
AAA_25
SKA2
Motif
Other DBs
NCBI-GeneID:
107946793
NCBI-ProteinID:
XP_016736745
UniProt:
A0A1U8NCK7
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All DBs
Position
A08:complement(56507818..56513914)
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AA seq
718 aa
AA seq
DB search
MSMATASAFVTSPLLQKISSTGFSTRTRHASKLKLSLHQSCTFAPFSLLPPTKSSRLKNI
SSLESRAYVTGPPIVSESDPRINGSKTDTVGAEPPKLISWRLLLSLLVQHKLRISISVLA
LVGGTTCTLSMPIFSGRFFEVLIGARKEPLWKLLSKVGLLYSLEPIFTVIFVVNMNTLWE
TVMSTLRAQIFRRVLIQKAEFFDRYKVGELSGLLTSDLGSLKDVVSENISRDRGFRALSE
VVGTICILFALSPQLAPILGLLMLFVSVSVAIYKRSTVPVFKAHGMAQASMSDCVTETFS
AIRTVRSFGGEKRQMLMFGSQVLAYQRSGIKLGTFKSINESLTRVAIYISLLALYCLGGS
KVKAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVISGAEIDAALA
YGLEKDIQKKEDDENIQLFISNGAFGKSQQLDSHYMSALKSTSDVGRLAWSGDVALEDVH
FSYPLRPDVEILNGLNLTLKCGTVTALVGSSGSGKSTIVQLLARFYEPTRGRITVSGEDV
RTSDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDIVSKNDIIKAAKAANAHEFIISL
PQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHL
MEGRTTLVIAHRLSTVQNAHQIALCSNGQIAELGSHLELLARKGQYASLVDTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggccactgcctccgcctttgtaacctcacctctccttcaaaaaatcagctcg
acgggcttctccactaggacccgacacgcgagcaaactcaaactcagtttgcaccaatca
tgtactttcgcgccattttcactccttccaccgacaaaatcctcaagattgaagaatatc
tcgagtttagaatcccgcgcttacgttaccggtcctccgatagtgagcgagtctgaccca
aggataaacggttcgaagactgacactgttggagctgagccaccgaaattgataagctgg
aggcttctattgagtcttcttgtccaacataaactcagaatcagtatttcggtcttggct
ctggttggcggcaccacctgtactctttcaatgcctatattttctggacgattcttcgaa
gtgctcataggcgccagaaaggagccgttatggaagctgcttagcaaagtggggcttcta
tactcattggagccgattttcacagttatatttgtggtaaatatgaataccttatgggag
acagttatgtcaacacttcgagctcagatttttagaagagttctgattcaaaaggcggag
ttttttgatcgatacaaggttggtgagctcagtggtttgctgacatctgatttgggatct
ttaaaagatgttgtcagtgagaacatttcaagggatcgtggtttcagggcactttctgag
gttgttgggacgatctgcatactgtttgcactgtctcctcaactagccccaattctaggc
cttttgatgctttttgtgtcggtttcggttgctatatacaagcgatcaactgtacctgta
tttaaagctcatggaatggcccaagcttctatgtccgactgtgtaacagaaacgttttct
gcaattcgaactgtaagatcttttggtggggaaaaacgtcaaatgttaatgtttggtagc
caggttcttgcatatcagagaagtggtataaagcttgggactttcaaatccataaatgaa
tctttgactagggttgctatttatatttctttactggccttatactgccttggaggaagc
aaagtgaaggcgggtgaactgtctgttggaaccgtggcttcattcatcggatacactttc
actttaacctttgctgtgcaagggctggttaatacatttggagaccttcgaggaactttt
gctgcggttgagaggattaactctgttatatctggagcagaaatagatgcagcacttgct
tatggtctggaaaaagatatccagaagaaagaagatgatgaaaatatccaattattcatc
tccaatggtgcttttgggaaaagccaacaattagattcacattacatgtcagcactgaaa
tcaacaagtgatgtgggaagattagcttggtcaggcgatgttgctctggaagatgtacac
ttttcttatcctttaaggcccgatgtggaaattcttaatggtcttaatttgactctaaaa
tgtggaactgtgactgccctagtgggttcaagtggttctggcaaaagcacaatagtacaa
ctattggcacgcttttatgagccaaccagaggtcgtataactgtttctggagaggatgtt
cggacatctgacaagagtgaatgggcccgagttgtttcaatagtgaatcaagaacctgtt
ctcttttctgtctctgttggagaaaatattgcatatgggcttccagacgatattgtatcc
aagaacgacattattaaggctgccaaagctgcaaatgctcacgaatttataatttctctt
ccacagggctatgacacactggttggtgagcgtggaggcttgctgagtggaggacagagg
cagagaattgcaatagcgagagctcttctcaagaatgctccaatcctgatcctcgatgag
gcaacaagtgctttggatgccgttagtgagcgcctggtacaggatgctttgaatcatcta
atggaaggcagaacaacattagtgattgctcatagattaagcacagttcagaatgcccat
caaattgctctttgctcaaatggccagatagcagaacttgggtcccatttggaattgctt
gctaggaaggggcaatatgcttctttagttgacacccaaaggctggcgtttgaataa
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