Gossypium hirsutum (upland cotton): 107946831
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Entry
107946831 CDS
T04793
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107946831
04075 Plant hormone signal transduction
107946831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107946831
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107946831
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
CENP-H
bHLH_INO4
CHGN
DUF7050
DMPK_coil
RBR
Motif
Other DBs
NCBI-GeneID:
107946831
NCBI-ProteinID:
XP_016736787
UniProt:
A0A1U8NCN1
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Position
D12:56669690..56672247
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AA seq
646 aa
AA seq
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MTDYRFASTMNLWTDDNASVMEAFMSSDLSALWQPPPQSSASTSTPAVVASSAAAAASGA
PDLLKSSVAPQSHPSVALFNQETLQQRLQALIEGAHECWTYAIFWQSSYDYSGPAVLGWG
DGYYKGEEDKGKRKLKTSSAVAEQEHRKKVLRELNSLISGSTAPTDDAVDEEVTDTEWFF
LVSMTQSFVNGGGLPGQALFNSTPVWVVGSERLASSTCERVRQGQVFGLQTMVCIPSANG
VVELGSTELITQSSGLMNKVRVLFNFNNGIEAGYLSMCNNIADEGENDPSSLWISDPNSG
VEYKESHNNNQNQQIEKSIQFHDNPSSSSLTENPSSIQQRQSQNFGLNFSDYGFDESYSV
RNGNSSHLFKPESEETLNFGESKRSGNVVEENKKKTSPTSRGSHEDGMLSFSSAVVLPSS
GMMKSSGGAGDSDNSDIEASVVKEAECVKPLEPEKKPRKRGRKPANGREEPLNHVEAERQ
RREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELSTKVQNAESEKQELQKQLEAMK
KELAKKDSSPQNPKTSNHLGNRLIELETEVKVIGWDAMIRIQCKRKNHPAARLMAALKEL
NLDVQHASVTVVNDLMIQQATVKMGNPFYTQEQLRLALISKIGSEI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgactgactatcgatttgcgtcgacgatgaatctttggacggacgataacgcatcggtt
atggaagcttttatgagttctgatctttctgctttatggcagcctccgccgcaatcctct
gcatccacttccacaccggctgttgttgcttcttctgctgctgctgctgccagtggtgct
cccgaccttttgaagtcctctgtggctccccaatctcacccctccgttgctcttttcaat
caagaaactctccagcagcgtctccaagctcttatcgaaggcgcccacgagtgttggact
tacgctattttctggcagtcctcctacgattactctggccccgctgtacttggatggggc
gatgggtattacaagggcgaagaagataaagggaaaaggaagttgaaaacttcgtctgca
gttgcggagcaagagcaccgtaaaaaagtgcttagagagcttaactctttgatttccggt
tccacagcccccaccgatgatgctgtcgacgaagaagtcaccgataccgagtggttcttt
ttagtttcgatgacgcagtctttcgtcaacggcggcgggctgccgggacaggctcttttc
aattctactccggtttgggttgttgggtcggagcgattagctagttcgacgtgcgagcga
gtgaggcaagggcaggtttttggtttgcaaaccatggtctgcataccgtctgcaaacggg
gtggttgaactgggctcaacagaacttatcacgcaaagctcaggtctgatgaataaggtt
cgggttttatttaatttcaataacggaattgaagctggttatttgtctatgtgtaataat
attgctgatgaaggcgaaaatgatccatcttcgctttggatcagtgatccaaatagcggg
gtcgaatataaggaaagccataacaataatcaaaaccagcagattgaaaagtcaattcag
ttccatgacaatccgagttccagtagtttaaccgagaatcccagctccattcaacagcgg
cagagtcagaacttcggcttgaatttctccgattatggttttgatgagagttacagtgtg
aggaatgggaattcttctcacctgttcaaaccagaatccgaggagacactgaattttggt
gagagtaagaggagtgggaatgtggtggaggagaataagaagaagacatcccccacttcc
agagggagtcatgaagatgggatgctttccttttcttctgctgtagtcttgccttcttct
ggtatgatgaaatccagtggaggtgctggagattcagataactctgatattgaagcttcc
gtcgttaaagaagctgaatgtgtcaaacctttggagcctgaaaagaagcctaggaaacga
gggagaaagccggctaatggtagagaagagcctctgaatcacgtcgaagccgagcgtcaa
agaagggagaagcttaaccagaggttttacgccttgcgtgccgtggtacctaacgtgtcc
aagatggataaagcatcactcctcggtgatgctatttcgtatattaacgagcttagcaca
aaggtacaaaatgcagaatcagagaaacaagagttgcagaaacaattagaagcaatgaag
aaagagctggcaaagaaagattcatccccacaaaaccccaagacatcgaaccaccttggg
aatagactgatagaattggaaaccgaagtgaaggttatcgggtgggacgcaatgattcga
atccaatgcaagagaaagaaccatccggcagcaaggttaatggctgctttaaaggaatta
aatcttgatgtgcagcacgctagtgtgacggtagtgaatgacttgatgatccaacaagcc
accgtaaagatggggaacccattttacacacaggagcagctcaggctagctctaatatcc
aaaatcggaagtgagatatag
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