Gossypium hirsutum (upland cotton): 107946840
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Entry
107946840 CDS
T04793
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107946840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107946840
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Others
AP-4 complex
107946840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
INTS1_R4
Cnd1
HEAT
HEAT_2
HEAT_EZ
PDS5
TOR1L1_N
NPHI_C
V-ATPase_H_C
Cnd3
Motif
Other DBs
NCBI-GeneID:
107946840
NCBI-ProteinID:
XP_016736798
UniProt:
A0A1U8NFQ3
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All DBs
Position
D12:55839471..55847236
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AA seq
955 aa
AA seq
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MGSQGGFYQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIR
LVYIEMLGHDASFGYIHAVKMTHDDSLLVKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQAMELLAHPKEAVRKKAIMALHRFYQKSPSSV
SHLVSNFRKRLCDNDPGVMGATLCPLFELIARDVNSYKDLVISFVSILKQVAERRLSKAY
DYHQMPAPFIQIKLLKILALLGSGDKQASENMYTVVGDIFRKCDSSSNIGNAVLYECICC
VSSIYPNPKLLESAADVISRFLKSDSHNLKYMGIDALGRLIKISPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKSTNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NQWFIQTMNRVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDNADTKLRSSAVESYLRILGE
PKLPSVFLQVICWVLGEYGTADGMFSASDITGKLCDVAEAYSNDETVKAYATTALMKIYA
FEIAARRKVDMLPECQSLMEELLASHSTDLQQRAYELQAVIGLDAHAVACIMPSDASCED
IEVDRDLSFLNDYIQEAIEKGAQPYIPESERSGMLNISNFRNQDHHEASSHGLRFEAYEL
PKPAVQSRIPQTLIASTEIVPVPEPMYPRESYQTTMPSIPSDAGSAELKLRLEGVQKKWG
RSTYTPATSTSNSTSQKTVNGTSQGDGASTVSSMRETYDSRKPQVEVSHEKQKLAASLFG
GSSKTEKSPATGHKAAKASSHVVEKSHVPKSSLEVASEKATPAQQPPDLLDLGEPTATST
ALQLDPFKQLEGLLDATEVASAVNGAPAASRSPDIMALYADTAAGIHNKNDADLLSGLSN
PSVTNMPGTTAMPQVTQSSSKGPNPKDSLEKDALVRQMGVNPSSQNPNLFKDLLG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggcggattctaccagtccaaggaatttctggatctggtcaagtccatc
ggcgaggctcgatccaaggctgaagaagaccggattgttctcaacgagatcgagactctc
aaacgccgtatctccgagcccgacatccccaaacgcaagatgaaagagtacatcatccga
ttggtttacatcgagatgctcggtcatgatgcttccttcggttacattcatgccgttaag
atgactcacgatgacagtctcctcgtcaaacgaactggttacttggccgttacgctcttc
ttgaacgaagatcatgatttgatcattttgattgtcaataccattcaaaaagatttgaag
tctgacaattacttggtggtctgcgccgccttgaatgccgtttgtaagttgatcaatgag
gagaccattcctgccgtgttgccgcaggctatggagttgctcgcacatcccaaggaggcc
gtacggaagaaggccatcatggctctccatcgcttttatcagaaatccccctcttccgtc
tcgcatcttgtctccaattttcgcaagaggctttgtgataatgatcctggagttatggga
gcaaccctttgtcctctttttgaacttatagcaagagatgttaattcttacaaagatttg
gtcatcagctttgtaagcattcttaaacaagtagctgaacgcagactatcaaaggcttat
gactaccatcaaatgccagctccatttattcagatcaagttgcttaaaattctggcgttg
cttggaagtggtgacaagcaagcaagtgaaaacatgtatactgtagtgggagacattttc
cgaaaatgtgattcatcaagtaatataggaaatgctgtactttatgagtgcatatgctgt
gtttcttctatatatcccaatcccaagttattagagtctgcagccgatgttatatcaaga
tttttaaagagtgacagtcacaacctaaaatacatgggcattgatgctcttggccgattg
ataaagataagtccagagattgctgagcaacatcagctggctgtgattgattgcttagag
gaccccgatgacactctgaagaggaaaacttttgaactactttacaaaatgaccaagtct
acaaatgtggaggttattgttgatcgcatgattgattacatgattagcattaatgataat
cattataaaactgaaatagcatctcgatgtgttgaacttgcggagcaatttgcaccaagc
aatcagtggttcatccagaccatgaatagagtttttgagcatgcgggagatctggtcaat
attaaggtagcacataatttgatgcggttgattgctgagggattcggagaggatgatgat
aatgcagatactaaactgagatcatctgctgtggagtcttatttgcgcattcttggtgaa
ccaaagttgccatctgttttccttcaggtaatctgttgggtattgggggaatatggaaca
gctgacggaatgttctctgcttccgatattactgggaagctgtgtgatgtggcagaggct
tattctaatgatgagactgttaaggcatatgcaactacagctctcatgaaaatatatgcg
tttgaaatagcagctcggaggaaagtagatatgctgcctgagtgccaatctttaatggaa
gagttattggcttctcactcaacagatttacagcaacgtgcctatgaactgcaagcagtg
attgggcttgatgctcatgctgttgcgtgtattatgccatcagatgcaagttgtgaagat
attgaggttgatagagacctttctttccttaatgattatatccaagaagcaatagaaaaa
ggtgctcagccctatattcctgagagtgaacgctctggaatgttaaatatcagcaatttt
aggaaccaagatcaccacgaggcttcatcacatggtcttaggtttgaggcttatgagctc
ccaaaaccagctgtgcagtccaggatccctcaaacattaattgcttcaactgaaatagtt
ccagtgcctgagccaatgtatcctagggagagctaccagactactatgccatctattcca
tcagatgcaggatcggcggagctcaagctacgactagagggagtacaaaagaaatggggt
agatcgacatatacacctgctacatctacctcaaattccacatcacagaaaacagttaat
gggacttcacaaggtgatggggcaagtaccgtaagttcaatgcgtgaaacctatgattca
aggaaaccacaagttgaagtttctcatgagaagcagaaacttgctgcttcactgtttgga
ggttcatcaaaaacggaaaagagccctgctactggtcataaggctgcaaaggcaagcagc
cacgtggtggagaagtctcatgtgccaaagtctagtttggaagttgcatcagaaaaggcc
actcctgctcagcaacctccggacttgcttgatttgggggaaccaactgccacaagtact
gctcttcaactagatccatttaaacaattggagggccttcttgacgcaactgaagttgct
tcagctgtaaatggtgcacctgctgcttccagatcacctgatataatggcattgtatgct
gacacagccgctggtatacacaataaaaatgatgctgatcttttatctggcttgtcaaat
ccttcagtgacaaacatgcctggcactactgcaatgcctcaagtaacacaaagcagcagt
aaagggccaaaccctaaagattccttggaaaaggatgcattggtgaggcagatgggtgtg
aatccatcgagtcagaatccaaacttgtttaaagatttacttgggtga
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