KEGG   Gossypium hirsutum (upland cotton): 107946840
Entry
107946840         CDS       T04793                                 
Name
(RefSeq) AP-4 complex subunit epsilon
  KO
K12400  AP-4 complex subunit epsilon-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04142  Lysosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    107946840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107946840
Membrane trafficking [BR:ghi04131]
 Endosome - Golgi transport
  Others
   AP-4 complex
    107946840
SSDB
Motif
Pfam: Adaptin_N INTS1_R4 Cnd1 HEAT HEAT_2 HEAT_EZ PDS5 TOR1L1_N NPHI_C V-ATPase_H_C Cnd3
Other DBs
NCBI-GeneID: 107946840
NCBI-ProteinID: XP_016736798
UniProt: A0A1U8NFQ3
LinkDB
Position
D12:55839471..55847236
AA seq 955 aa
MGSQGGFYQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIR
LVYIEMLGHDASFGYIHAVKMTHDDSLLVKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPQAMELLAHPKEAVRKKAIMALHRFYQKSPSSV
SHLVSNFRKRLCDNDPGVMGATLCPLFELIARDVNSYKDLVISFVSILKQVAERRLSKAY
DYHQMPAPFIQIKLLKILALLGSGDKQASENMYTVVGDIFRKCDSSSNIGNAVLYECICC
VSSIYPNPKLLESAADVISRFLKSDSHNLKYMGIDALGRLIKISPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKSTNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NQWFIQTMNRVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDNADTKLRSSAVESYLRILGE
PKLPSVFLQVICWVLGEYGTADGMFSASDITGKLCDVAEAYSNDETVKAYATTALMKIYA
FEIAARRKVDMLPECQSLMEELLASHSTDLQQRAYELQAVIGLDAHAVACIMPSDASCED
IEVDRDLSFLNDYIQEAIEKGAQPYIPESERSGMLNISNFRNQDHHEASSHGLRFEAYEL
PKPAVQSRIPQTLIASTEIVPVPEPMYPRESYQTTMPSIPSDAGSAELKLRLEGVQKKWG
RSTYTPATSTSNSTSQKTVNGTSQGDGASTVSSMRETYDSRKPQVEVSHEKQKLAASLFG
GSSKTEKSPATGHKAAKASSHVVEKSHVPKSSLEVASEKATPAQQPPDLLDLGEPTATST
ALQLDPFKQLEGLLDATEVASAVNGAPAASRSPDIMALYADTAAGIHNKNDADLLSGLSN
PSVTNMPGTTAMPQVTQSSSKGPNPKDSLEKDALVRQMGVNPSSQNPNLFKDLLG
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgggctcccaaggcggattctaccagtccaaggaatttctggatctggtcaagtccatc
ggcgaggctcgatccaaggctgaagaagaccggattgttctcaacgagatcgagactctc
aaacgccgtatctccgagcccgacatccccaaacgcaagatgaaagagtacatcatccga
ttggtttacatcgagatgctcggtcatgatgcttccttcggttacattcatgccgttaag
atgactcacgatgacagtctcctcgtcaaacgaactggttacttggccgttacgctcttc
ttgaacgaagatcatgatttgatcattttgattgtcaataccattcaaaaagatttgaag
tctgacaattacttggtggtctgcgccgccttgaatgccgtttgtaagttgatcaatgag
gagaccattcctgccgtgttgccgcaggctatggagttgctcgcacatcccaaggaggcc
gtacggaagaaggccatcatggctctccatcgcttttatcagaaatccccctcttccgtc
tcgcatcttgtctccaattttcgcaagaggctttgtgataatgatcctggagttatggga
gcaaccctttgtcctctttttgaacttatagcaagagatgttaattcttacaaagatttg
gtcatcagctttgtaagcattcttaaacaagtagctgaacgcagactatcaaaggcttat
gactaccatcaaatgccagctccatttattcagatcaagttgcttaaaattctggcgttg
cttggaagtggtgacaagcaagcaagtgaaaacatgtatactgtagtgggagacattttc
cgaaaatgtgattcatcaagtaatataggaaatgctgtactttatgagtgcatatgctgt
gtttcttctatatatcccaatcccaagttattagagtctgcagccgatgttatatcaaga
tttttaaagagtgacagtcacaacctaaaatacatgggcattgatgctcttggccgattg
ataaagataagtccagagattgctgagcaacatcagctggctgtgattgattgcttagag
gaccccgatgacactctgaagaggaaaacttttgaactactttacaaaatgaccaagtct
acaaatgtggaggttattgttgatcgcatgattgattacatgattagcattaatgataat
cattataaaactgaaatagcatctcgatgtgttgaacttgcggagcaatttgcaccaagc
aatcagtggttcatccagaccatgaatagagtttttgagcatgcgggagatctggtcaat
attaaggtagcacataatttgatgcggttgattgctgagggattcggagaggatgatgat
aatgcagatactaaactgagatcatctgctgtggagtcttatttgcgcattcttggtgaa
ccaaagttgccatctgttttccttcaggtaatctgttgggtattgggggaatatggaaca
gctgacggaatgttctctgcttccgatattactgggaagctgtgtgatgtggcagaggct
tattctaatgatgagactgttaaggcatatgcaactacagctctcatgaaaatatatgcg
tttgaaatagcagctcggaggaaagtagatatgctgcctgagtgccaatctttaatggaa
gagttattggcttctcactcaacagatttacagcaacgtgcctatgaactgcaagcagtg
attgggcttgatgctcatgctgttgcgtgtattatgccatcagatgcaagttgtgaagat
attgaggttgatagagacctttctttccttaatgattatatccaagaagcaatagaaaaa
ggtgctcagccctatattcctgagagtgaacgctctggaatgttaaatatcagcaatttt
aggaaccaagatcaccacgaggcttcatcacatggtcttaggtttgaggcttatgagctc
ccaaaaccagctgtgcagtccaggatccctcaaacattaattgcttcaactgaaatagtt
ccagtgcctgagccaatgtatcctagggagagctaccagactactatgccatctattcca
tcagatgcaggatcggcggagctcaagctacgactagagggagtacaaaagaaatggggt
agatcgacatatacacctgctacatctacctcaaattccacatcacagaaaacagttaat
gggacttcacaaggtgatggggcaagtaccgtaagttcaatgcgtgaaacctatgattca
aggaaaccacaagttgaagtttctcatgagaagcagaaacttgctgcttcactgtttgga
ggttcatcaaaaacggaaaagagccctgctactggtcataaggctgcaaaggcaagcagc
cacgtggtggagaagtctcatgtgccaaagtctagtttggaagttgcatcagaaaaggcc
actcctgctcagcaacctccggacttgcttgatttgggggaaccaactgccacaagtact
gctcttcaactagatccatttaaacaattggagggccttcttgacgcaactgaagttgct
tcagctgtaaatggtgcacctgctgcttccagatcacctgatataatggcattgtatgct
gacacagccgctggtatacacaataaaaatgatgctgatcttttatctggcttgtcaaat
ccttcagtgacaaacatgcctggcactactgcaatgcctcaagtaacacaaagcagcagt
aaagggccaaaccctaaagattccttggaaaaggatgcattggtgaggcagatgggtgtg
aatccatcgagtcagaatccaaacttgtttaaagatttacttgggtga

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