Gossypium hirsutum (upland cotton): 107946889
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Entry
107946889 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107946889
03036 Chromosome and associated proteins [BR:
ghi03036
]
107946889
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107946889
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107946889
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107946889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
Prok-RING_1
zf-RING_5
PHD
Prok-RING_4
TRAF3_RING
zf-RING_4
zf-RING_6
zf-RING_10
zf-RING_15
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
107946889
NCBI-ProteinID:
XP_016736872
UniProt:
A0A1U8NCX6
LinkDB
All DBs
Position
A12:complement(100733361..100736578)
Genome browser
AA seq
683 aa
AA seq
DB search
MAADDVNQQPGDAELCMLCKASSNPGEDIILCTVCQAPWHQSCLISSRESHFISDDYLGC
PECENRINGDDLDTLTPTNNAAAASSFSAADNSMVAKILAIQADKSLTEEEKARKRQELL
SGRPAVESPELEDKDDGEKNKCKVEKFKGKAKTTVEASKVSDESINCTICLNMPERPVTT
PCGHNFCLKCFNQSVRQGKRNCALCRKPIPAAMANQPRINLTLVSAIRMAKMLKSSGACE
GSSQVYEYIHNQDRPDKAYTTERAKRNGMANAASGRIFVTIPTDHFGPILAKNEPVRNRG
VLVGDTWGGRLECRQWGGHFPPITGIAGQKNHGAQSVILSGGYIDDEDHGEWFLYTGSGG
RDLSGNKRTNKIQSFDQEFKSANDALRLSCRKGYPLRVIRCAKDKHSSYAPVKGLRYDGI
YRVEKCWRNVGVQGFKVCRYLMVRCDNAPAPWTSDVHGDRPRPLPAIQELERATDITERK
ESPSWDFDEADGCWKWMKPPPKSRQKEKKNGEPAAASRKIVRRTVNKKPLSEAARKRIQK
EFGCRICSDVLYQPVTTACGHNFCKLCLVGVFAGRSTLRERNAGGRNLRFKKNVMKCPAC
PNDLADDWYDLEVNIELKNLIAKQMRECEHFSSAFEKRTMDEDSSEDLSGNSDNEEGSED
DEVELKPEKPSKQRKVDDQRETN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagatgatgttaaccagcagcctggtgatgctgagctttgcatgttgtgcaaa
gccagttcaaatcccggagaggatatcatcctttgcaccgtctgccaagcaccttggcac
cagtcttgcctcatttccagtcgtgaatcccatttcatctccgatgattacttgggttgc
cccgagtgtgaaaatcgcatcaatggagatgatctcgacaccttgacccctacgaataac
gcggctgctgcttcttccttttccgccgctgacaattctatggtcgctaagattttggcc
attcaggctgacaagtcactgacggaggaggagaaggccaggaagaggcaggagttgctt
agcgggagaccagctgttgaatccccggaactggaagacaaggacgatggtgaaaaaaac
aagtgtaaggttgagaagttcaaagggaaagcaaagactactgtggaagcgtccaaggtt
tctgatgagagcattaactgcaccatttgtttaaacatgcccgaaagacctgttacgacg
ccgtgcgggcacaatttctgtttgaagtgtttcaaccaatcggttcgacaagggaagcga
aattgtgcgttgtgtcgtaaaccgatacctgcggcaatggcaaatcaacctcgtatcaac
cttacgcttgtgtctgccatccgaatggcaaagatgctgaaatcgagtggtgcttgtgaa
gggtcttcacaggtttatgaatatattcacaatcaagatagaccagacaaggcttatact
acggaaagggcaaagaggaacgggatggccaatgctgcaagtggtcggatctttgtcacg
attccaacagatcattttggtccgatactggccaaaaatgaaccggtgaggaaccgagga
gtgcttgtcggagacacttgggggggtaggttggaatgcaggcaatggggtggtcacttt
cctcctattacaggtattgcaggccagaaaaatcatggtgcacagtcagtcatactctct
gggggttacatagatgatgaggatcatggagaatggttcctttacactggaagtggaggg
agagatctgagtgggaacaaaaggaccaacaagatccagtcttttgatcaagagtttaag
agtgcgaatgatgcgcttcgtctcagttgcagaaaaggttaccctcttcgggttatcagg
tgtgccaaggacaaacattcttcatatgctccagtaaaagggttacgttatgatgggatt
tacagggttgaaaaatgctggcgaaatgttggagttcaaggcttcaaggtctgcagatat
ttaatggttaggtgcgacaatgctccagccccatggaccagtgacgtgcacggcgaccgc
cccagacctttgccagcaattcaagagcttgaaagggctaccgatataacggagagaaaa
gaaagcccgtcgtgggactttgatgaagctgatgggtgctggaagtggatgaaaccacca
ccaaagagcaggcaaaaagaaaaaaaaaatggcgaacctgccgctgcttccaggaagatt
gtgaggagaacagtaaataaaaaaccactgagtgaagcggctagaaagaggattcaaaaa
gaatttggttgcagaatctgttcggacgtgctgtatcagccagtgacgacagcttgtggt
cataatttttgcaagctttgcttagtaggtgtatttgctgggaggtcaactctaagggag
agaaatgcaggtggtcggaacctccgctttaaaaaaaatgtcatgaaatgccctgcttgc
cctaatgatttagctgatgattggtacgacttagaggtgaacatagagttgaagaacctg
attgcgaagcagatgagagagtgtgagcattttagcagtgcctttgagaaaagaaccatg
gacgaagattcgtctgaagatttgtctggcaacagcgataatgaggaaggttcagaggat
gatgaagtggagctcaaaccagaaaagccttcaaagcaaaggaaagttgatgatcaacgt
gaaaccaattga
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