Gossypium hirsutum (upland cotton): 107946909
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Entry
107946909 CDS
T04793
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107946909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107946909
03036 Chromosome and associated proteins [BR:
ghi03036
]
107946909
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
107946909
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
107946909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR54
NBCH_WD40
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
107946909
NCBI-ProteinID:
XP_016736891
UniProt:
A0A1U8ND04
LinkDB
All DBs
Position
A12:101003729..101006544
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AA seq
461 aa
AA seq
DB search
MDESATWRLLESDWYSPRRLHDCPTHYRFPGDRFLPNRCLMDLDKAHTLLTSKTPQFNTS
SNFNQAYRQKLIENLSLDSQGRPFKIMVFRGSPKSSRKSIRFVDELRQEVAAIFEKDCKQ
TPYRCIPKGEKRVLDAPRLRNDYYSNIMSWGMNNILAVALGPELYLWNSEDQAVHKLLQV
RGGNDWPTSVTWSEDARTLAIGYMCSNLQLWDVESSKLIRSLQGHSGRIASTAWNGHILT
SGSRDKSIINHDVRAANSLASCIKRHADEVCGLKWSTEGNRLASGGNENLLYIWEASKMS
SSKFLHRLSDHCAAVKALAWCPYQNNVLASGGGLSDGCIKIWNTEKGICINNIETKAQIC
GLEWNRHHKEILSGHGYSIRENQNKLCLWRYPSMTKVGELGNHKSRIINLCQSPDGITVI
SAGADETLRFWDVFGPPTAGAGNSMVSDLQGLLSFRTSLLR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagcgcaacgtggagactccttgaatcggattggtactctccaagacgactc
cacgactgtcccacccattacagatttccgggggatcgcttcttacccaacagatgtttg
atggatcttgataaagcccacactttgttgaccagcaagaccccgcagttcaacactagt
tcaaatttcaatcaagcatatcgtcaaaaactgattgagaatctatctttagattctcaa
gggagaccatttaagataatggttttcaggggaagcccaaaatccagtcgaaaatccatt
cgttttgttgatgagttgagacaagaagttgcagccatatttgaaaaagattgcaaacaa
actccataccgatgcatccccaagggagaaaagagggttttggatgcgccaaggctcaga
aatgactactattcgaacatcatgagttggggtatgaacaacattcttgctgttgctttg
ggtcccgaactctacttatggaactcagaggaccaggcagtacacaagttgttgcaggtt
cgtggtgggaacgattggcctacgagtgtaacctggtccgaggatgccagaactttagcc
attggatatatgtgctccaatcttcagctctgggatgttgagtcttccaaacttatcaga
agccttcaaggtcatagtggaaggatagcatccacagcatggaatggtcacattttaaca
tcaggaagccgtgacaaatccattatcaatcatgatgttagagcagcaaacagcttggct
tcctgcataaaaagacatgctgatgaagtgtgtggcttgaaatggtcaactgaaggcaat
agattggcaagtggaggcaatgaaaatctgttatacatatgggaagcttcaaaaatgagt
tcatccaaatttctgcatcgactcagtgatcattgtgctgcagtcaaggcccttgcttgg
tgcccttaccagaacaatgttcttgcctctgggggaggcttgagtgatggttgtattaag
atatggaatacagaaaaaggaatttgtattaacaacatagaaaccaaagcacagatttgt
ggcctggagtggaacagacatcacaaggagatattgagtggccatggttacagcataagg
gagaatcagaacaaactgtgcctatggaggtacccttcaatgaccaaagtgggggagtta
gggaatcacaaatccagaattatcaacctatgccagagccctgatggaataactgtgata
tctgctggggcagatgagacccttcgattttgggacgtttttggaccccctactgctggt
gctggcaactcaatggtttcagatcttcaaggtcttttatcttttagaacatccctatta
aggtaa
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