Gossypium hirsutum (upland cotton): 107946925
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Entry
107946925 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase HOS1
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107946925
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107946925
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107946925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
Serine_rich
VMAP-M1
FecR_C
Motif
Other DBs
NCBI-GeneID:
107946925
NCBI-ProteinID:
XP_016736918
UniProt:
A0A1U8NG16
LinkDB
All DBs
Position
D12:57358861..57364570
Genome browser
AA seq
967 aa
AA seq
DB search
MEKPEINGPLFRSSSISNGGTFRSASPVLSLQPNFSSQAVQEALEHLASIDLSELFNEAK
IEYCRATRDLRSCSRYVQYALNSCGHASLCAECSQRCDCCPICRTPLIKSGNSRFRLRLF
DECIDAGLISRRCDERFQDKEDRDNQLTADVQRLYSFFDVALENNLVSLVCHYVTDVCMD
ETAVSSDVVTALLLDEKVVKDWVKRTFKNMATELQRIYYLEIEEMKNRLGLLLKFSVRLT
SLSSVLEVLESSFKGRLSAELHDLHHLQESILKTKQHLEITMWCIRHHFLEQVRSRHADF
TSWRNHVRERKSAAIVRAWPPPDVLDLSTNSTGQEASLFIEDALENLDIYEKIGDESDFA
FLQKNGALSFLQSKIGGITGYYPFESLRAAVDILFLRGGSDLVVAKQAIFVYYLFDRHWS
RPKEEWRDIVDDFAASFGINRHSLLESFIFCLLDDHSDEALLESCQLLPEISGPETHPKI
AQVLLERQNPKAGQMVIRWSGRDGGSQLVSLSEAVTIVRVKVECGLLTEAFTYQRMLCAK
VREKKFKYELSGDAFDDLKGQSRSWMDWLEALVTEFCCLCIRRNMVDRIIELPWNGEEEK
YIHKCLLDCASDDPTTSIGSLLVVFYLQRYRYVEAYQVNVKLWSLEEDFISTHSGDEEFL
EALSRMESHRQRRKKLVDKGIELLPEVLQQQVKTGTLPDIVVASGQEDEMPTRSGSPKSA
SLLVPSTSDSVVLRPDHMVTPLRPPVSEIPRILDGYVNNSRVEAGNHGSTSILQGRLFAD
AGVSNVEIGKNFNFDNISGPGIHRVNPTYATPLKGINQSSSRELSNRHLRQKQSDKIISE
GEQNGFVSQVHSPSPPYSRRVTANPASTPSSNFGLFKGAANNLSSNISGKRGQSDRDDGG
WNVPPTEDVMDVSWSHRERSFEDRNAHVGLRWRSDETSDDEEQCPDRTMEVGATPVRGHR
RRRFTRR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccggaaatcaacggtcctcttttccgttcgagctcaataagcaatggcggc
acctttaggtcagcaagtcccgttctttctcttcaacccaacttcagtagccaagccgtt
caggaagctttggaacacttggcatctatcgaccttagtgagttattcaatgaggcgaaa
attgagtactgtcgagcaactagagacttaagaagctgtagtcgatatgtacagtatgcg
ttgaactcatgtggacatgcttctctttgtgcggaatgtagtcaacgctgtgattgttgt
ccaatttgtagaaccccattgataaaaagtggtaacagtagatttcgtcttcgccttttt
gatgaatgcatagatgctggcctcatctctagaagatgtgatgagaggtttcaagataaa
gaagatagagataatcaactcactgctgatgttcaacgactttattcgttttttgatgta
gccttggagaataacttggtttcgttggtctgtcattatgttacagatgtatgtatggat
gaaactgctgtttccagtgatgttgtcactgctttgttgctggatgagaaggttgttaag
gattgggtcaagcggacatttaaaaacatggcaacagaacttcagcgtatatattatctt
gagatagaagagatgaaaaatcggttgggtttgcttctaaaattttctgtacgtctgacc
agtttatccagtgtacttgaagttttggagtcttctttcaagggccgtctttcagcagag
cttcatgacttgcaccaccttcaagagagtatattgaagacaaagcagcatcttgagatc
acaatgtggtgtataaggcaccacttcttggaacaagtgaggtctcgtcatgctgatttc
acatcctggcgtaatcatgtccgtgaaaggaaatcagctgcaatcgtgcgggcgtggcct
cctcctgatgtgttagatctctcaaccaactccactggacaggaagcttctcttttcatt
gaggatgcactagaaaatcttgacatatacgagaagataggagacgagtcagattttgca
tttttgcagaagaatggcgccttgtcctttcttcagtctaaaataggtggaattacagga
tattatccttttgaaagtcttcgagctgctgtggatatcctctttctacgtggtggttct
gatttggtggttgccaagcaagcgatttttgtgtattacctgtttgatcggcattggagt
aggccgaaggaagaatggagggacattgttgatgactttgcagcctcctttggcatcaac
aggcattccttacttgagtcattcattttctgtcttctggatgaccactcagatgaagct
ttactggaatcttgtcaacttctccctgagatctctggcccagaaactcatccaaagatt
gcacaagttctgttagaaaggcagaatcctaaggcagggcaaatggtgatacgctggtct
ggtcgtgatggcggatcacagttggtttcacttagtgaggctgttactattgttcgggtg
aaagtggagtgtggacttttgacagaagcatttacatatcagcgaatgctctgtgcaaaa
gtccgggaaaagaagttcaagtatgaactcagtggcgatgcatttgatgacttgaaaggt
caaagcaggtcctggatggactggttagaagcattggtcaccgaattttgttgtttatgt
attaggaggaatatggttgatcgaataattgagttaccatggaatggtgaggaggagaaa
tatatacacaaatgcctgttagattgtgccagtgatgacccgacaactagtattggaagt
ctccttgttgtattctatcttcagcggtatcgatatgttgaggcatatcaagtcaatgtt
aaactttggagcttggaagaagacttcatttcaactcattctggcgatgaagaatttcta
gaagctctatcaagaatggaatcacatcgtcagaggagaaaaaaattggttgataaaggc
atagaattgcttcccgaagtcctacaacaacaagtaaagacgggaacattgcctgatata
gtagttgcttctggccaagaggatgaaatgccaacaagatctggttctccaaaatcagca
agtttgttggttccgtccacttctgattctgttgttctacgaccagaccatatggtgact
cctttgagaccacccgtttctgaaattcctagaatattggatgggtatgtcaacaattct
cgtgttgaagctggtaaccatggatctacatcaatactccaggggagattatttgcagat
gcaggagtatcaaatgttgaaattggcaaaaacttcaattttgataacatctcaggtccc
ggaattcatcgagtaaatcccacatatgctacaccattaaaaggtatcaatcagagttca
tcaagagagctttcaaacagacacctacgacaaaaacaatctgataaaatcatttcagag
ggtgagcaaaatgggtttgttagccaagttcacagtccaagtcctccttattcccgaaga
gtgacggctaatcctgcttctacacctagcagtaactttggattgtttaaaggtgccgca
aataacttaagttcaaatatttctggtaagaggggtcaatcagatagagatgacgggggg
tggaatgtacctcctactgaagacgtaatggatgtctcttggagccatagggagagatct
tttgaggacagaaatgcacatgtggggctaagatggagatctgatgaaacgagcgatgac
gaagaacagtgccccgacagaaccatggaagttggtgcaacccctgtaaggggacataga
aggaggagattcacgagaagatga
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