Gossypium hirsutum (upland cotton): 107947032
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Entry
107947032 CDS
T04793
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107947032
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
107947032
TFIIIC, fungi type
107947032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_8
TPR_1
TPR_17
TPR_7
TPR_11
TPR_16
TPR_12
TPR_9
TPR_CcmH_CycH
TPR_6
TPR_Slam
ANAPC3
ARM_TT21
ARM_TT21_4th
DUF7017
Alkyl_sulf_dimr
NatA_aux_su
ARM_TT21_5th
TPR_15
TPR_20
RPN7
Coatomer_E
HAT_PRP39_C
TPR_21
BCDHK_Adom3
HrpB1_HrpK
Suf
Motif
Other DBs
NCBI-GeneID:
107947032
NCBI-ProteinID:
XP_016737057
UniProt:
A0A1U8NDE7
LinkDB
All DBs
Position
D12:complement(58710599..58726993)
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AA seq
856 aa
AA seq
DB search
MSGSGNLPLDYEALAEKKRKALADMQGSEGSSKKARKEDISEGIMDEIMQTLNCGRRRKS
SKKRGRRKGRGNKLSPQIQRIVGDATLHYGNGRFKEAISVLKEGVQLEPKFPHLYHMLGL
SYKALGDNKRAFQFYIIAGLLKPKDPDLWKLLFTWSIEQENVSLTCHCLSKAIMADPTDI
SLRYLQASLYDELGDYQKAAESYEQIQQISPDNVEALKSGAELYQKCGQIERSFAILEGY
LEGHQDEADLSVINLLVSMLMQNNAYERALQQIEQAHAIYYSGKELPINLKTKSGICHIH
LGDIEKAEVFCSVLQSIAHDHADLVTEVADTFMTLGHVNSALKYYNMLENDDGIDDDHLH
HKIAQCYISTGEKVLAIKFLRKALERLENNVDARLNLASLLIEDSKEDEAISLLSPPQSF
DLQNINKNSDTSKSWWLNGKIKLKLCNIYRAKGMMEDFVNTILPLVQESLYIESLGIKIK
VRRRLRDSDLFERVKKVDDRQTDGVFCGSRPMVTAADRLKASRARKLLQKKAALKEEKKA
AALAAGLDWHSDDANDESEEEHFKEPPLVNLLKDEEQQDLIIDLCKALESLERYYEALDI
IKLVLKSGHNFFPVEKQQQLRSLGAQMAYYTMDSKHGFDCIKHIVQQHPYSITAWNCYYK
VLPRSGKCYSRHCKFLRFFRSKHKDCIPPIVISGHQFTVLSHHQDAAREYLEAYKLLPEN
PLINLCVGTALINLTLGLRLQNKHQCIAQGLAFLYNNLRLCENSQEALYNIGRACHHVGL
VTLAVSYYEKVLAMKEKDHPIPKLPNENWDHAVENHKKDGYCDLRRETAFNLHLIYRKCG
AMDLARQVLKDHCTFD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttccggcaaccttcctcttgactatgaagctctggcggagaagaagcgcaaa
gcacttgccgatatgcagggcagtgaaggatcatcaaagaaggctagaaaagaggatatt
tcggaagggattatggatgaaataatgcaaactttgaactgtggtcgtcggagaaaatca
agcaagaaacgaggtaggcgaaagggaagagggaataaactgagcccccaaattcagaga
attgttggagatgctacacttcactatggaaatggtcgtttcaaagaggccatatctgtt
ctgaaggaaggtgttcaacttgaaccaaaatttcctcatttatatcatatgctcgggctt
tcttataaagcccttggtgataataaaagagcttttcaattctacatcatagctggactt
cttaagccaaaagatcctgatctgtggaaactgctttttacctggtccatagagcaagag
aatgttagtctgacctgccattgcctttctaaagcaataatggcagatcctacagatatt
agtttaagatatcttcaagcatcactttatgatgagctcggtgattaccagaaagcagcc
gagtcatatgaacaaattcagcaaatctctcctgacaatgttgaagcattgaaaagtggg
gctgagttataccaaaaatgtggtcagattgaacgatcttttgctattttggagggctat
cttgagggtcatcaagatgaggctgatttgagtgttattaatcttcttgtttctatgtta
atgcaaaataatgcatatgaaagggctcttcagcaaattgagcaagcccatgctatctac
tattcaggaaaagaactgcctatcaacttgaaaactaaatcaggaatttgccacattcac
ctgggagatatagagaaagcagaggtgttctgcagtgttttgcaatccatagcacatgat
catgctgacttggttactgaggttgcagatacatttatgactcttgggcatgttaactct
gcattgaagtattacaatatgttggagaatgatgatggaattgatgatgaccatttacat
cacaaaattgctcagtgttacatatccacgggagaaaaagtgctagcaattaagttcctt
cgaaaagctctggaacgactagagaacaacgtcgatgctcgtttaaatttggcttccttg
cttattgaagattctaaagaagatgaagccatttctttgctttctcctccccaaagtttt
gatttacagaatattaacaagaattctgatacatctaaatcgtggtggctcaatgggaaa
ataaaattgaagctatgcaacatttatagagctaaagggatgatggaggattttgtcaat
accattcttccgttggtacaagagtccctttatattgaatctcttgggataaagataaaa
gttaggcgccgcctaagagacagtgatctatttgaaagagtcaaaaaagttgatgatcgg
caaactgatggtgtattttgtgggtcaagaccaatggtaactgcagcagataggttgaaa
gcttccagagcaagaaagctgctacaaaagaaagcagctttgaaggaagaaaagaaagct
gctgcacttgctgccggacttgattggcatagtgatgatgccaatgatgaatctgaggaa
gaacattttaaagaaccacctctggttaatcttctaaaagatgaggagcagcaagacctt
atcatagacttatgcaaggcattggaatctttggaaaggtattatgaagcattggatatt
atcaaacttgtattaaaatcaggtcataactttttccctgttgagaagcagcagcagctt
cgatcacttggagcacaaatggcatactacaccatggattccaagcatgggtttgactgc
ataaagcacattgttcagcagcacccttacagtattactgcttggaactgctattacaaa
gtacttccaagatcgggaaaatgttattcaaggcattgtaagtttttacgttttttccgt
agcaaacacaaagattgcataccacctattgtcatttctggccatcagtttaccgtgctt
agtcatcaccaagatgctgctcgagaataccttgaagcttataagttgttgccagagaat
cctttaattaatttgtgtgttgggactgcattgatcaatttaacccttggacttagactc
caaaacaaacatcagtgtattgcacaaggtttagctttcctctacaacaaccttcgtctt
tgtgagaacagccaggaagcactgtataatatcggacgggcatgtcatcatgtcggactg
gtgaccctggcagtttcatactatgaaaaggtgttagcgatgaaggagaaggatcatcca
atcccaaaactccccaatgagaactgggatcatgcggtagagaaccacaaaaaagatggg
tattgtgaccttcgcagggagacagctttcaatttgcatttaatctatagaaaatgtgga
gcaatggatcttgctcgccaagtcttgaaagatcattgcacctttgattga
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