Gossypium hirsutum (upland cotton): 107947034
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Entry
107947034 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107947034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107947034
03036 Chromosome and associated proteins [BR:
ghi03036
]
107947034
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107947034
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107947034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107947034
NCBI-ProteinID:
XP_016737063
UniProt:
A0A1U8NGC4
LinkDB
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Position
A08:86717901..86725573
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AA seq
1003 aa
AA seq
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MFGTTNPFGQPASSPFGQTNPSSNPFAPKSSFGSPTPFGSQTGGSLFGGTSTGVFGAAQP
SSSFSSTTTFGASSSPAFGSSMPAFGSSSTPAFGNSSSFGGPSGFGQKPAFGFGSTPTQS
SPFGSSGQQSQPAFGSGIFGSSTPFGSTQSAFGATSTPAFGATSTPAFGAATSTPAFGAT
STPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATGTPAFGSTSTPAFGSTGSPF
GSTGTAFGVSNAPAFGASSTPAFGTSSTPAFGASSTSSFSFGSSPAFGQSTAAFGSSPFG
TTTVGAQSSAFGSQSSSPAFGSTTFGQSAFXGQRGGSRVAPYTPTTDADSGSGTQPAAKL
ESISAMHVYKDKSHEELRWEDYQLGDKGGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQ
TSENPFSGTSANPFSIKPPSFNSASFTTSTTTSNPFQSTSSSLFGPSSSTTPSIFSSSAP
TFGTGSSLFSSSVTPSFSSSPSIFGTGAAPATTPTFATSLNFGSSQGSSLFTSTPAIGQA
SSTFGQNTSSFGPTSIFNTPSTGFSGNMFSSSLSLAPSNPTAFGSTTPSFASPFQPAQTS
GAFSFSNLGQTQMSGGSGIFGQSNVGLPSVTQNAAVVQPVTISNPYGTLPAMPQMSIGRA
GTAPSVQYGISSMPVTDKPVPVRISPLLTSRYISQRRIRLPARKYHPNNDNPKVPFFNDD
EETPSTPKADAVFIPRENPRALVIRPTENWPSRVPVEKVSPLKDASTLVHENGKISDDGS
NAEDKYKNPAENGLVKERIHHNQKANGVHHDHSVQKEDSFMTLSGHRAGEAAIVYEHGAD
VEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRHGYGSIKFLGETDVRCL
DLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKRTREQYTEGPKVEKY
KEMLKKKAEDQGAEFLSYDPMKGEWRFRVNHFSKYKLEEEDVL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaacccttttgggcaaccagcaagtagcccatttggccagaccaat
ccaagtagcaatccgtttgcacctaaatcttcctttggtagtccgactccttttggctcc
caaacagggggttcactatttggtggtacttctactggggtgtttggtgcagcccaacct
tcttcttcattttcctcaacaaccacctttggtgcatcatcatctccggcatttggaagt
tccatgcctgcttttgggtcttcgtctactcctgcttttggcaattcatcatcttttggt
gggccatctggttttggtcagaagccagcatttggttttggatctactcccactcaatca
agtccttttggaagctcagggcagcaatcacaacctgcatttggtagtggaatatttggt
tcctccacaccctttggttcaacacagtctgcgtttggtgccacaagcacccctgcgttt
ggtgccacaagcacccctgcgtttggtgccgccaccagtacccctgcctttggtgccact
agtacccctgccttcggtgccacaagcacccctgctttcggtgccacaagcacccctgct
tttggtgccacaagcacccctgctttcggtgccacaagcacccctgctttcggtgccact
ggtaccccagcctttggttccacaagcacccctgcctttggttcaactggaagtcctttt
gggagcactggaactgcatttggtgtgtctaatgccccagcatttggagcttcaagcaca
cctgcttttggcacatctagcactccagcttttggagcgtcttctacttcttccttcagc
tttgggtctagccctgcttttggacaatcaacagcagcatttggtagtagtccttttggg
acaactacagttggagcacagagttccgcttttggaagccaatcctcttctcctgcattt
ggaagcacgacctttggccagtctgcatttnggggtcaacgtggaggcagtagagtagct
ccttatacacctacaactgatgcagatagtgggagtggtacacagcctgctgcaaaattg
gagtcaatatcagcaatgcatgtttacaaagataaaagtcatgaggagctgagatgggag
gattatcagttaggagataaaggtggaccgcaaccggctgctcagccttctggaggaatt
ggctttggtgtgtcagctgcacctgcaagtccttttggctcttcttcaacaattggtcaa
acatctgaaaatcctttttctggcacgagtgctaatccatttagtataaaacccccatct
tttaatagtgcaagttttacaacctcaactactacatcaaatccttttcaatcaacatca
tcaagcctttttggcccatcttcatcaacaacaccttcaatatttagttcttcagctcct
acatttggaactggttcatctctttttagttcatctgtaactccttcattttcatcctcg
ccatccatatttggtactggtgcagctccagcaacaactcccacatttgccactagttta
aattttggcagcagtcagggatcttctctgttcacttctacccctgcaattgggcaggca
agctctacctttggacagaatactagtagcttcggtccaactagcattttcaatacgcct
tccactgggtttagtgggaatatgttttcgagctctctgtcattggctcctagcaaccca
actgcctttggctcaacaactccctcttttgcttcacctttccagccagctcagacttct
ggagctttcagctttagtaatcttggtcagacacaaatgagtggtggatcaggcattttt
ggtcagagtaatgttggcctaccgtctgtgacacaaaatgctgctgtagtacaacctgtg
actattagtaatccctatggaacactccccgcaatgcctcaaatgtcaattggtcgggct
gggactgcaccatctgttcaatatgggatttctagcatgcctgtcacggacaaacccgtt
cctgttagaatatcgcccctgttgacttcacggtacatttcacaaagacggattaggttg
cctgcaaggaaatatcatcctaataacgacaatccaaaggttccatttttcaatgatgat
gaagagacaccgagcacacctaaggctgatgctgtttttattcctagggaaaatccaagg
gctttggttattcgtcccactgaaaattggccttcaagagttcctgtagagaaggtatca
cctttgaaggatgcatccactctggtgcatgagaatggtaaaatttctgatgatggctcc
aatgctgaggataaatataaaaacccagctgaaaatggtcttgtgaaggagcggattcat
cataaccagaaagctaatggagtccatcatgatcattctgtacagaaagaggattcgttc
atgacactcagtggccacagggctggtgaggctgctattgtgtatgagcacggggctgac
gtcgaggctctaatgcctaagctcaggcgttctgattactatacagaaccccgaatccaa
gaactggcagcaaaggaaagggctgaaccagggtactgtcgccgtgtcaaggactttgtg
gttgggcggcatggttatggaagcataaagttcctgggtgagacagatgtgagatgcctt
gatctagagtcccttgtccagttcaacaaccgcgaggtaattgtttacatggatgacagc
aagaaacctcctgttggacaaggtcttaataaacctgcagaagtaacgctgcttaacatc
aagtgcttcgacaaaaggaccagagagcagtatacagaagggccaaaagtggagaaatat
aaggagatgcttaagaagaaggctgaggaccaaggagcagagtttctctcctatgatccc
atgaaaggagaatggaggttcagggtaaatcacttcagcaagtacaagttggaagaggaa
gatgtgctgtaa
DBGET
integrated database retrieval system
