KEGG   Gossypium hirsutum (upland cotton): 107947088
Entry
107947088         CDS       T04793                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107947088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107947088
   04131 Membrane trafficking [BR:ghi04131]
    107947088
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107947088
Membrane trafficking [BR:ghi04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107947088
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_Gbeta DSE1_N Beta-prop_EML
Other DBs
NCBI-GeneID: 107947088
NCBI-ProteinID: XP_016737131
UniProt: A0A1U8NDQ7
LinkDB
Position
D12:59326956..59329530
AA seq 325 aa
MEKPVATLDKGAICSAWNYCGQRLAAGSVDGYLSILDSRDPLSSSFTSSSKFKVHEGCVV
KVAWIPPEYGVAVACIAEDGTLSIWEELVEGTNPLEWKLCTSFKTSSKVLDVQFSVTQTS
LKMFAAYSDGFVKVFELLDPLELKNWQLQAEFQNVIDSVSIVGKASCLTACISWNPQNGE
GQESSFILGFNSDTPQLNSPKVWEFDPAHQRWLPVAELALPGDKGDQIYSVAWAPNIGRP
YEVIATASEKGISVWRVGSTTDMDGRLSMDKVALLSGHNSEVWQMEWDMSGMTLATTGGD
GRVRLWQSNLNGTWHEQATLEPTSS
NT seq 978 nt   +upstreamnt  +downstreamnt
atggagaaaccagtagcgacactcgataaaggcgcaatatgctcggcctggaactactgc
ggccagagattagccgccggctccgtcgatggttatctctcaattttagattctcgtgac
cctttgtcttcttcattcacttcctcctccaaattcaaggtgcacgaaggttgcgttgtg
aaggttgcttggatcccgcccgagtatggggttgctgttgcttgcattgcagaagatggg
actttatcaatatgggaagagcttgtagaaggtacaaatcctcttgaatggaagctatgc
acgagcttcaaaactagctctaaggttttagatgttcaatttagtgtcactcaaacgagc
ttgaaaatgtttgctgcttactcagatggcttcgtgaaagtctttgagctcctcgatcct
ttggaactcaagaattggcaacttcaggccgaatttcaaaatgttatagattcggtttcc
atagtagggaaggcttcatgcttgacagcatgtatttcatggaatccacaaaatggtgaa
ggccaagaatcaagctttattttgggtttcaattctgacactccacaactcaattccccc
aaggtgtgggaatttgatccagctcatcagagatggctgccagtagcagagttggctttg
cctggtgacaagggagatcaaatatattctgttgcatgggcaccaaacattggacggcca
tatgaggtaatagctactgcatctgaaaaaggaatttctgtatggcgtgttggatcaacc
actgacatggatggaaggctctccatggataaggttgcattgctttctggacataacagt
gaggtgtggcagatggaatgggatatgagtggaatgaccttggcaaccaccgggggtgat
gggcgtgtaaggctgtggcaatctaacttgaacggcacttggcatgaacaagcaacgctt
gaacccacttcatcttag

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