Gossypium hirsutum (upland cotton): 107947149
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Entry
107947149 CDS
T04793
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107947149
04120 Ubiquitin mediated proteolysis
107947149
09126 Chromosome
03083 Polycomb repressive complex
107947149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107947149
04121 Ubiquitin system [BR:
ghi04121
]
107947149
03036 Chromosome and associated proteins [BR:
ghi03036
]
107947149
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107947149
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107947149
Cul7 complex
107947149
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107947149
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107947149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
BTB
Motif
Other DBs
NCBI-GeneID:
107947149
NCBI-ProteinID:
XP_016737210
UniProt:
A0A1U8NDW1
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All DBs
Position
A01:107329936..107331207
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AA seq
156 aa
AA seq
DB search
MASTSRKIMLRSSDGETFEVEEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILSKVLEY
CKKHVDAAADKEKTPDDELKVWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADM
IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacttcgaggaagataatgttgaggagctccgacggagagacttttgaggtg
gaggaagcggtggcggttgagtcgcagacgatcaagcacatgatcgaggacgattgcgcc
gacaacgagatccctctcccaaacgtcaccagcaagatcttgtccaaggtccttgagtac
tgcaagaagcatgtcgatgctgctgccgacaaggaaaagactcctgatgacgaactcaag
gtttgggatgctgattttgtcaaggttgaccaaaataccctctttgatctcatcctggca
gcgaactatctgaatatcaagagcttgctggacttgacctgccaaactgtggctgatatg
ataaagggaaagacacccgaggagattcgcaagaccttcaacatcaagaacgatttcacc
cccgaggaagaagaggaggttaggagggagaatcaatgggcattcgagtga
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