KEGG   Gossypium hirsutum (upland cotton): 107947149
Entry
107947149         CDS       T04793                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03083  Polycomb repressive complex
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107947149
   04120 Ubiquitin mediated proteolysis
    107947149
  09126 Chromosome
   03083 Polycomb repressive complex
    107947149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107947149
   04121 Ubiquitin system [BR:ghi04121]
    107947149
   03036 Chromosome and associated proteins [BR:ghi03036]
    107947149
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107947149
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107947149
   Cul7 complex
     107947149
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107947149
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107947149
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 107947149
NCBI-ProteinID: XP_016737210
UniProt: A0A1U8NDW1
LinkDB
Position
A01:107329936..107331207
AA seq 156 aa
MASTSRKIMLRSSDGETFEVEEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILSKVLEY
CKKHVDAAADKEKTPDDELKVWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADM
IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 471 nt   +upstreamnt  +downstreamnt
atggcgtcgacttcgaggaagataatgttgaggagctccgacggagagacttttgaggtg
gaggaagcggtggcggttgagtcgcagacgatcaagcacatgatcgaggacgattgcgcc
gacaacgagatccctctcccaaacgtcaccagcaagatcttgtccaaggtccttgagtac
tgcaagaagcatgtcgatgctgctgccgacaaggaaaagactcctgatgacgaactcaag
gtttgggatgctgattttgtcaaggttgaccaaaataccctctttgatctcatcctggca
gcgaactatctgaatatcaagagcttgctggacttgacctgccaaactgtggctgatatg
ataaagggaaagacacccgaggagattcgcaagaccttcaacatcaagaacgatttcacc
cccgaggaagaagaggaggttaggagggagaatcaatgggcattcgagtga

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