Gossypium hirsutum (upland cotton): 107947170
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Entry
107947170 CDS
T04793
Name
(RefSeq) plant UBX domain-containing protein 10
KO
K18726
FAS-associated factor 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107947170
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107947170
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
UBA_4
UBA_8
TAP_C
Thioredoxin_7
DUF4778
CDC45
DUF6739
Motif
Other DBs
NCBI-GeneID:
107947170
NCBI-ProteinID:
XP_016737232
UniProt:
A0A1U8NDX9
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Position
D12:59667122..59670153
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AA seq
459 aa
AA seq
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MVDVADKLACFQAVTGLEDPDLCTEILQAHGWDLELAISSFTSSNQSSASTITSDSDPRD
SLDPTQSASSSGLVPAPNPSIAWKLVTLPFSVISGSLGLVSGAVGLGLWAAGGVLSYSLG
MIGLGQGRGGESSARLVSVSAAASEAMEFVAAFERDYPTTRPNFVGEGFMDALQRSRNSF
KLLFVYLHSPDHPDSPVFCGRTLCSEAVAAFVNENFVAWGADIRASEGFKMSNSLKASRF
PFCAVVMPTTNQRIALLQQVEGPTSPEEMLTMLQKVLEESSPVLVAARLDAEERRNNMRL
REEQDAAYRAALEADQARERQRREEQERLEREAAEAEQKRKEEEEAHERAAREAAEKEAA
RARMREQKALSLGDEPEKGPSVTQVLVRFPTGERKERRFHSTATIQSVYDYVDSLGCLEV
EDYSLVSNFPRVTYGRDKQSLSLKEAGLHPQASLFVELN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtagccgataaattggcatgttttcaagcggtgacgggcctcgaagatccc
gatttgtgtacggaaatcctccaggctcatggttgggacctcgaactggctatctcttct
ttcacctcttccaatcaatcctctgcttccaccattacctccgattctgaccctcgcgat
tctcttgaccccacccaatccgcatccagttcgggtctcgttcccgctcctaaccccagc
atagcttggaaactcgttacattgcccttctctgtgatatccggtagcctagggttagtc
tctggagctgtcgggcttggattatgggccgccggcggagttctttcgtattcccttggg
atgatcggcctgggacaggggcggggcggggaatcatcggcacgattggtctcggtctca
gctgcggcttctgaagctatggaattcgtggcggcatttgagagagactacccgacgact
aggccgaatttcgtcggtgagggtttcatggacgccttgcagaggtcaaggaactccttt
aagctgttgtttgtgtacttgcactcgccggaccacccggattctcctgtattctgtgga
aggaccttgtgttccgaggcagtggctgcctttgtgaatgagaattttgtggcgtggggc
gccgacattagggctagtgagggttttaaaatgagtaatagcttgaaggcatctaggttc
ccattttgtgccgtggttatgcctactacgaaccagaggattgcactccttcaacaggtt
gagggaccaacatctccagaagaaatgctcacgatgctgcagaaagtgcttgaagaaagt
tctcctgttcttgttgctgcaagactggatgcagaagagagaagaaacaacatgcgtttg
agggaggagcaagatgctgcttacagagcagcacttgaagctgatcaagctagagaacgc
cagaggagagaggagcaagaacgtctggaaagggaggccgccgaagctgaacagaaacgg
aaggaagaagaagaagctcatgaaagagcagcacgtgaagctgctgaaaaagaggctgcc
cgggctagaatgcgagaacaaaaagccttatcacttggtgatgaacctgagaaaggacca
agtgttacacaggtattggtacggtttcccacaggtgaacgcaaagaaaggaggtttcac
agcacggcaacaatccaatcagtttatgactatgttgattcattgggttgcttagaagtt
gaggattacagccttgtgtccaactttcctagagttacatatggtcgagataagcaatcc
ttgagcttgaaagaagcaggattacatcctcaggccagcctttttgtggagctaaactag
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