Gossypium hirsutum (upland cotton): 107947206
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Entry
107947206 CDS
T04793
Name
(RefSeq) transcription factor MYC1
KO
K13422
transcription factor MYC2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107947206
04075 Plant hormone signal transduction
107947206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107947206
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107947206
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
bHLH_INO4
DUF5547
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
107947206
NCBI-ProteinID:
XP_016737274
UniProt:
A0A0U2GNI7
A0ABM3B8S9
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Position
A12:105935237..105937167
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AA seq
475 aa
AA seq
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MSSSSSSSLITLGQDASPTLQQRLHFIVQSRPEWWVYSIFWQASRDVDGRVVLSWGDGYF
RGTRDGTGKSINRLSPSKLGSSFERKRSGKDQVQAYFNEVMDVDRMVDGDVTDYEWYYTV
SMTRSFAVGDGILGKAFGSGSHIWLGGDHELQLYQCERVREARMRGIQTLVCLPTSFGVV
ELGSSDIIMEDWGTLQLTKSIFSSGINNSLGSNQPAHDSQPQISTPSIPFVDFGMVSGDQ
KERILEDKQQVEPKKETTGLGRSSSESDGDFASADTEFNASGRSKKRGRKPGNGKESPIN
HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLSDAVAYIKELRSKIDKLEAQLLVQS
EKSKLNPINVFENQTTKSAFDNTMKQSSTYWPKTVEVDVKIVGSEAMIRVRSPDIDHPAA
RLMDALRDLELPVHHASVSNVNDLMLQDVVVRVPTGIFITDEMLSTAILQRCTLN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcttcttcgtcttctcttattaccttaggtcaagatgcctcacctactttg
caacaacgcctccatttcatcgtccaaagtaggcctgaatggtgggtatactccattttc
tggcaagcttcaagggatgttgatggtcgcgttgttttgtcatggggcgatggctatttt
cgagggacccgagatggtacgggaaaatccatcaataggctgagcccttccaaattgggg
tccagtttcgagaggaaaaggtcgggaaaagatcaggtgcaagcttattttaatgaagtg
atggacgtggaccgtatggtagatggcgatgtgactgattatgagtggtactataccgta
tccatgacccgatcattcgctgtaggtgatgggattcttgggaaggctttcggatcaggc
tcccatatttggttgggtggagaccatgaactccaattgtaccagtgtgagcgtgttaga
gaagctcgaatgcgagggattcaaacattagtttgtcttcctacatccttcggggttgtc
gaattgggatcttctgatatcatcatggaagactggggcacccttcaactcactaaatcg
atattcagttctgggatcaacaacagcctgggttcaaatcaacctgcccatgattcccaa
ccccaaatctcaaccccaagtattccttttgttgattttggaatggtttcaggtgatcaa
aaggagcggattcttgaagacaaacaacaagtcgagcccaagaaagaaactacaggttta
ggccgttcgtcatcggaatctgatggggatttcgcctctgcagacaccgagttcaatgcc
agcggccggtcgaaaaagagaggtagaaaaccagggaatgggaaagaatcccctataaac
cacgttgaagcagaaaggcaacgacgtgagagactgaaccatcgtttctacgcacttcgt
tccgtggttccaaacgtatccaagatggacaaagcctcattactttcagatgcagtagcc
tacatcaaggaactaagatcaaaaatcgataaactagaggctcaactcctagtacaatct
gaaaaatccaagttgaaccccatcaatgttttcgaaaaccaaactaccaaatccgcattc
gacaataccatgaaacaatcctctacttattggccaaagacagtggaagttgatgtgaag
atagtaggatccgaagctatgattcgggttcgaagtccagatatcgatcatccagctgca
cgattgatggatgcacttcgagacctagagctaccagttcaccatgccagtgtatcaaac
gtcaatgatcttatgctacaggatgttgttgtcagagtccctactggaatattcataacc
gacgagatgcttagtactgcaatccttcagagatgcacgttgaattag
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