Gossypium hirsutum (upland cotton): 107947231
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Entry
107947231 CDS
T04793
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107947231
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107947231
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
107947231
NCBI-ProteinID:
XP_016737296
UniProt:
A0A1U8NE58
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All DBs
Position
D12:complement(60562060..60566890)
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AA seq
675 aa
AA seq
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MDRSRSKRNYYYDQDYDGETMGRTKPRYNNHHYLPNSHRHRGNNPNNNNNGGNNGRPPNK
SGGGSGAGGGGQDSSLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIP
GDEERIIEISDTRRRDPEGRMPSFSPAQEALLLVHERILESDSQFGFGGGGGEEEEEYGA
VARGGGNRVATRLVVSRMHVGSLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEE
IVQVVGDVNAVKNAIAIISSRLRESQHRDRSGHFHGRMHSPERFFPDDDYVPNINNASRR
SSMEGSFGSRMSTMNYRGNNYSSRPSGFIEAGAAPMSDSGQPLYGEELVFRILCPIDKVD
SVFGEPDGIVDLLQNEIGVDVKVADPMAGSDEQIITISSEEGPDDELFPAQEALLHIQTQ
IVDLVPDKDNIVTTRLLVPSTEIGCLEGRDGSLSELKRLTGANIQILSGEELPSCVSRPN
EIVQIVGEIKAARDALVEITSRLRSYLYRDFSLDPPPSAPSITATASMGNVSPNLTPSRD
GQTASPGTYQNMPTPATPSSSKEVVKSGAETVKQTESERREDVPSAIAISRIAVPLVTRS
TLEVAIPDYAVPKLIAKSKTKLVQISELSGANVTLVEDRPNETQKIIQISGTMEQSERAK
SLLQGFILSSQEDGP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacagatctagatccaagaggaactattactatgaccaagactatgatggggagacc
atgggtaggacaaaacctcggtacaacaaccatcactacctacctaatagtcatcgtcac
cgtggaaacaatccgaacaacaacaacaacggaggcaacaacggtcgacctccgaataag
agcggtggtggtagcggcgccggcggagggggacaagactcttcccttatggtcactact
agctaccgcattctttgtcacgatatgaaagctgggggtgtaatcggtaagtcgggtagt
attatcaagtctataagacaacataccggcgcgtggatcaacgtacacgagctgattccc
ggtgatgaagaacgcatcatcgagatatctgacacgcgtcgccgtgaccctgaagggaga
atgccgtcgttctcgcctgctcaggaggcgttgttacttgtacatgagaggattctggag
agtgattcacagtttgggtttggtggtggcggaggagaggaggaggaggaatacggagcg
gtggcgagaggaggagggaacagggtagcgacgaggttggttgtttcgaggatgcatgtg
ggttctttattggggaaaggaggaaagattattgagcaaatgagaatcgaaacaaagacc
cagattaggattctgcctagagaccatactttgccccgttgcgtttccatgtctgaggag
attgttcaggttgtaggtgatgtaaatgctgtaaaaaatgctatagcaattatttcatca
cgcttaagggagagccagcatcgtgaccgcagtggtcatttccacggacgaatgcattca
ccagagcggtttttccctgatgatgattatgttccaaacataaacaatgcttcacgtaga
tcatctatggaaggttcttttggttctcggatgtctactatgaattacagaggcaacaat
tattcctcacgtccatctggcttcattgaagctggggctgctcctatgtctgacagtgga
cagcctctttatggtgaggagcttgtgtttagaatactttgccctattgacaaggtggat
agtgtttttggagagccagatggcatagtagatttacttcaaaatgaaattggtgtggat
gtcaaggttgctgatcccatggccgggtcagatgagcagataattaccatttcttccgag
gagggtcctgatgatgagttgtttccagctcaagaggctttgttgcatatccaaactcag
attgtcgaccttgttcctgataaagataacatagtaactactaggctacttgttccatct
accgaaattggatgtttagagggaagagatggatcgttatctgaactgaaaagattaact
ggtgcaaacatacagatattgtcaggggaagaacttccgtcttgtgtatcacggcccaat
gagattgtgcagattgtgggggagataaaggcagctcgagatgctcttgttgagatcaca
tcacgattacgcagttacttgtatagggacttctctctggaccctccaccttcagcacca
tctatcactgcaacagcgtccatggggaatgtttctccaaacttaactccatctcgtgat
ggtcaaactgccagtcccggaacctatcaaaatatgccaacgccagcaacaccatcatca
tcaaaggaagttgtgaaatctggtgctgaaacagtgaagcagactgaatctgaacgccga
gaagatgtaccaagtgcaattgcaattagcagaatcgccgtaccacttgttactaggagt
acacttgaagttgccataccggactacgccgttcccaagctcatagcaaaatcgaaaacc
aaactggtccagatcagtgagttgtctggtgccaatgtgactctggtcgaagacagacca
aacgagacacaaaagatcattcaaatatcaggtactatggaacagtctgagagagccaaa
agcctgcttcaaggcttcattttaagctcacaagaagatggaccgtaa
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