Gossypium hirsutum (upland cotton): 107947257
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Entry
107947257 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107947257
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107947257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
107947257
NCBI-ProteinID:
XP_016737334
UniProt:
A0A1U8NE72
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All DBs
Position
D12:complement(60856157..60861236)
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AA seq
437 aa
AA seq
DB search
MASLSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADIAGNVLLVTIEGQ
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKNALDGRIIPRYL
LSENISPCSLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSNQFNLGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGALQALIQYPDVQTAIAAK
EALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNPAMVNPQPSVLGQQPVQT
MGHQYNETQYAPGVQQQPTMPPQPSAGWGSSAVPPMPQPMMNNHNPYIPPASMPQMTPGM
MQMPGQGGIPPFRPTHM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctatcaagtcagccgcagttccgctacactcaaccaccgtcgaaggtgctg
catttaagaaacttgccatgggagtgtacggaggaagagctgattgagctggggaagcca
tttggtaaggtcgttaataccaaatgcaatgttggcgccaatcgaaatcaagctttcatc
gaatttgctgatttgaatcaggctattgctatgatatcatattatgcttcatcttcggag
cctgctcaagttaggggcaaaacggtctacctacaatattctaacaggcaagagattgta
aacaacaaaaccacggcggatattgccggaaatgttcttttggtaacaatcgaaggtcaa
gatgcgcggcttgtttccattgatgttttgcatctggtattttcagcttttggatttgtg
cataagattactacctttgagaagacagctggatttcaggcattggtgcagttttcagat
gcagaaacagccacatctgcaaaaaatgccttggatggacgaatcatccctaggtatctg
ctttctgaaaatatatctccttgttcgcttaggatcacatattctgctcatacagatctg
agtgtgaaatttcagagccacaggagcagggactataccaatccctatcttcctgttgct
ccttctgctatagatggaagtaaccagttcaatttgggtcttgatgggaaaaagctagaa
cctgaaagtaatgttttacttgcatctattgagaacatgcaatatgctgttaccttggat
gtgctgcacatggtcttctctgcttttggccctgttcaaaagattgccatgtttgataag
aatggtgccctgcaggctctaattcagtaccctgatgttcagacagctattgctgccaag
gaggccttagaagggcactgcatatacgatggagggttttgtaaacttcatctctcgtat
tcacgccacactgatcttagtataaaggtcaataacgataggagcagggattatacaatc
cctaatcctgccatggtgaacccacagccttcagttctggggcaacaaccagttcaaaca
atgggtcatcaatacaatgagacacaatacgctccaggtgtacaacaacaacctacaatg
cctccacaaccttccgctggatgggggtcatcggctgttccaccgatgccccaacctatg
atgaataatcataatccttacataccaccagcctcaatgccacaaatgactccgggaatg
atgcaaatgccaggccagggtggcatacctcctttcagacccactcatatgtaa
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