Gossypium hirsutum (upland cotton): 107947260
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Entry
107947260 CDS
T04793
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107947260
Transcription machinery [BR:
ghi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
107947260
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DUF6697
Motif
Other DBs
NCBI-GeneID:
107947260
NCBI-ProteinID:
XP_016737339
UniProt:
A0A1U8NHN6
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Position
D12:complement(60873158..60876482)
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AA seq
516 aa
AA seq
DB search
MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHNLLPVETA
KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE
GETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ
SKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQ
EEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLSISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttagtgtttctagttcagctgcccgaactccagtaggattaggcacaaag
ttttctactcaaagatgtacatttagaagaccttgtattgtggcatttaaagcagataaa
tctaataatacggctctagttacgcttcgagaccataatcttttgccggtggaaacggct
aaggagcacccgaagagacgcgggaaagcgaaaaaggcttccaagactgtaaaccgtgac
tttactgatgaaggttctccgtacaccgtggacgtagattacaacgaagccgctgccaaa
ctcgaaaacatttataagcttagcccttcgactcaaacatttgatgaaaaagggagtgaa
ggtgagacaaaaggacgccagctgaggaggaagagatctaaagaaagtgatgggaaagcg
gataatggtgatgataagatcgtggttcggagccagactaagaagaatagaagattgggc
cttgataaaaggattgaactgaaaaagaatagagaagaaaagtcagttgtttctggccag
agcaaaaagggtatctcgaatgaaagtgagaagattgataggcttgtccgggactattcg
gcttcaaccgatttggtcagcctggactggaagaaaatgaagatacctccggttctgccg
tccaccgaacatacttggttgtttaagctaatgcagccaatgaaggcactgcttgaggca
aaagagaacttgcaaaaggatctgggtagagatcctacagaagatgaattagctgaggca
acaaattcgagtgcagctcaagtgagaagacagttagaggttggtcgagctgctagaaat
aagctcattaagcacaacctccggctcgttttgtttgtgataaaaaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggctggagttaaaggacttatcaca
gccatcgaccgctttgaaccaagaaggagattccgtctttctacatacggtcttttttgg
attaggcatgcaattatacgttccatgaccctatcaagcttcacgcgtgtttcatttgga
cttgaatcagttagagtagaaatccaaagagccaaactggaattattgtttgaacttcat
agagaaccgacagacgatgaagtaatcaaaagagttgggatttcccccgagaggtaccaa
gaagtaatgagggcctcgaaacccgttgcatctcttcatttgaggcattccgtcacacaa
gaagagttcattagtggaatcaccgatgtcgatggtgttggaggcgatcaccgaaggcaa
cctgctcttctcaggcttgcacttgatgatgtgctcgattctctgaagccaaaagagagc
ctggtaatcaggcagagatacggactcgacggtaaaggtgatagaacattaggagaaatt
gctgggaacttaagcatttcgagagaaatggtccgaaagcacgaagtaaaggcacttatg
aagctcaagcatccagcccgagttgattatctccgccgatacgtcgtctga
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