Gossypium hirsutum (upland cotton): 107947261
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Entry
107947261 CDS
T04793
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107947261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107947261
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107947261
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
107947261
NCBI-ProteinID:
XP_016737340
UniProt:
A0A1U8NE78
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Position
D12:complement(60906341..60908446)
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AA seq
329 aa
AA seq
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MDDNLCEFSDEPEFVGEDDLFSIFESLDGLIDFPVPFTPLEEMTTATTAAAVGVGGGSAQ
KSAPLMESETEETSPKTKRQKLGSLEETMNTDGPQRMSHITVERNRRKQMNEHLSVLRSL
MPCFYVKRGDQASIIGGVVDYINELQQVLQALEAKKQRKVYSEVLSPRVVLSPRPSPLSP
RKPPLSPRLNLPISPRTPQPGSPYKPRLQKGYLSPTMAASTSLEPSPTSSTSSVDNNNEL
VANSKSHVADVEVKFSGPNLVLKTVSPRIPGQALKIISALEELSLEILNVNIITVDETML
NSFTIKIGIECQLSAEELAQQIQQTFGHC
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttgtgtgagttttccgatgagcctgagttcgtcggtgaagatgattta
tttagtatttttgaaagtttagatggtcttattgatttcccagtaccttttactccgtta
gaagaaatgacgacggctacaacggcggcggctgtgggtgttggtggtggtagtgcacaa
aaatcagctccattaatggagtcggaaacggaggaaacttcaccgaaaaccaagagacaa
aaactgggttctttagaagaaacaatgaatactgatgggcctcaaaggatgtctcatatt
accgtcgaacggaaccggaggaagcaaatgaacgaacatttatcggtgctgagatcgctg
atgccgtgtttttatgtcaaaagaggtgatcaagcatccatcattggtggtgtagtggat
tatatcaacgagttacagcaagttttacaagcactcgaagctaaaaaacaaaggaaagtt
tacagtgaagtgttgagtccaagggtggttttaagtccaagaccgtcaccactcagtcct
cggaagccaccgttgagtccccgtttgaacttgccaataagtccgagaacaccacaaccc
ggtagtccgtacaaaccacggttgcaaaagggttacctctcaccaacaatggcggctagt
acttcacttgaaccctctcccacttcttcaacttcctccgttgacaacaacaacgaactc
gtcgctaactcaaaatcacacgtcgccgacgtggaagtgaagttttcaggtcccaacctt
gttttaaagacagtatctcctcggattcccggtcaagctctcaaaataatctcagctctg
gaagaactctcactggaaatccttaatgtcaacattatcaccgttgatgaaaccatgctt
aactctttcacgatcaagattggaattgaatgccaactgagtgctgaagaattggctcaa
caaatccagcaaacattcggccattgctag
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