Gossypium hirsutum (upland cotton): 107947546
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Entry
107947546 CDS
T04793
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107947546
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
107947546
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GFIT
Motif
Pfam:
Pectinesterase
PMEI
Motif
Other DBs
NCBI-GeneID:
107947546
NCBI-ProteinID:
XP_040962750
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Position
D12:43271180..43273230
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AA seq
557 aa
AA seq
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MSVKVVITAVSVILLVGVVAGFFAVIQHRKHSGGTELSLQMKAVSNFCSATSYKEACQKS
LNSVNSTDPEQFIGRSILVAEEAVKKFFNYSDSLIVKVKNNSRTKMALDDCKDMMSYAVQ
SLQASYSEVGNAQLHSISDRVSDLRTWLSAVISYQESCLDGFESDEGMKENMTIGITDAR
ELTSNALAIVSKLSEILSKFGLQLKAPKTSRRLLSTGKDKYPSWFSNVDRKLLAKIDNSN
IKPNAIVAMDGSGHFKTIAEALAAAPKQSNVRHVIYVKAGVYKEYITVDKKTINILMYGD
GPRKTIVTGNKNYVDGTPTWKTSTFSAIGDGFICRSMGFQNTAGPSKHQAVALRIQSDRS
AFFDCRMDGNQDTLYNHANRQFFRNCVISGTIDFIFGDSPTLIQNTLIIARRPMDNQLNT
VTAQGKTDANENTGIVIQNCRIVPEQILFPDRFKIATYLGRPWKQYSTTVVMESTLADFI
RSEGWTPWAGEAFEDTLYYAEYNNRGPGASLDRRVDWKGYHKIDKNTAMRFTAQSFLLSR
ENWLPQTGIPYIAGLRS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaaagtagtaataacagcggtttccgttattcttttggtgggagtcgtcgct
ggcttttttgccgtaattcaacatcgaaaacacagtggtggtaccgaattgtctctgcaa
atgaaggctgtttctaatttttgttcagctacaagttacaaagaagcttgccaaaagtcc
ctcaactctgttaatagcactgatcctgaacaatttatcggtcggtcgattttagtggct
gaagaagctgttaagaagttctttaattattccgactcgttgattgttaaggtcaagaat
aatagcaggactaagatggctttggatgattgtaaggacatgatgagctatgcggttcaa
tcccttcaagcatcgtactccgaggtgggtaatgctcaattgcacagcatttctgaccgt
gtatcggatctcaggacctggttaagtgctgttatatcgtaccaagagtcttgcttggat
ggtttcgaaagtgatgaaggcatgaaagaaaacatgacaatcggcattactgatgctaga
gaactcacttccaatgctttggcaattgtgtccaagttatcggaaattctttcaaaattt
ggtctccaacttaaggctcctaagacatcccgtagacttctttccacagggaaagataag
tatccatcatggttctcgaatgtagaccgtaagcttttggctaaaattgataatagtaac
ataaaaccaaatgctattgtggctatggatggaagtggccatttcaagaccattgctgaa
gccctagctgcagctcccaagcaatccaatgtccgtcatgtgatctatgttaaggctgga
gtctataaagaatacatcaccgtggacaaaaaaaccattaacatccttatgtatggtgat
ggcccaagaaagactatagtcactggtaataagaattatgtcgacggcacaccaacatgg
aaaacttctactttttctgctattggagatggattcatttgtagatctatggggttccaa
aacactgctggtccttcgaagcatcaggctgtggctcttcgtattcaatctgatagatca
gcgttctttgattgccgaatggatggcaatcaagacacattgtacaatcatgcaaatcgt
cagttttttcgcaactgtgtcatttctggaaccattgacttcatctttggtgactcccct
actcttatccaaaacacattgataattgcaaggagaccaatggataatcaacttaacaca
gtgaccgcacagggcaagaccgatgctaatgagaacaccggtattgtaatccaaaattgc
aggatcgtccctgagcaaatactctttcccgataggttcaagattgcaacatacttaggc
aggccatggaagcaatattctacaactgtggtcatggagtccactttggcagacttcatt
cggtccgagggatggacaccatgggctggagaagccttcgaagacactctttattatgct
gagtacaataaccgtggccctggtgctagtctcgataggagagttgactggaagggttat
cacaagatcgataaaaacactgctatgagattcacggctcaatcattccttttgagtcgt
gagaattggttgccccaaactggcattccttacatagctggtttgagatcttga
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