KEGG   Gossypium hirsutum (upland cotton): 107947567
Entry
107947567         CDS       T04793                                 
Name
(RefSeq) syntaxin-124-like
  KO
K08486  syntaxin 1B/2/3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    107947567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107947567
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107947567
Membrane trafficking [BR:ghi04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    107947567
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   107947567
  Exosomal proteins of other body fluids (saliva and urine)
   107947567
SSDB
Motif
Pfam: Syntaxin SNARE STX6_10_61_N DUF6261 Allexi_40kDa SURF6 Laminin_II Spectrin_SYNE1 MCPsignal
Other DBs
NCBI-GeneID: 107947567
NCBI-ProteinID: XP_016737670
UniProt: A0A1U8NF74
LinkDB
Position
D12:45727322..45728680
AA seq 303 aa
MNDLFSSSFKKYSDLKQQVHLDDVEAGEETVNLDNFFEDVDNVKDDMRVVEQIYNRLQES
NEETKTAHSAKAMKDLRARMDSDVKQLLKRVKVIKGKLEALEKSNAAHQKLPGSGPGSSA
YRTRTSLVSGLGSKLKDMMDDFQGLRAKMTAEYKETVERRYFTVTGQKADEEMIENLIER
GEGETLFEKAIQEQGRGQIVDTISEIQERHDAIQEIEKGLIELHQLFLDMAVLVEAQGYQ
LNDIESHVARASSFVMRGADQLELAKEYQKSSKKWGCIALAIAVFLLVIILFPVLSSTLL
KNA
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaatgatctgttttctagttcattcaagaaatattcagatctcaagcaacaagttcac
ttggatgacgtagaggctggggaagagacagtgaaccttgataacttctttgaagatgta
gacaatgtgaaggacgatatgagagtggttgagcagatttacaacaggctgcaagaatca
aatgaagagaccaaaacggctcacagtgctaaagccatgaaggatcttcgagctcgaatg
gactcggatgttaagcagctcctgaaacgggtcaaagtcataaaggggaaactcgaagca
cttgaaaaatcaaatgcggctcatcagaaacttccaggatctggtcctggatcatctgct
tatagaaccaggacatccctagtgagcggcttaggcagtaaactaaaggatatgatggat
gattttcaagggttaagagccaaaatgacagcagaatacaaagaaacagtggagagaaga
tacttcacagtaacaggacagaaagcagatgaagaaatgatcgaaaacctgatagaaagg
ggagaaggtgaaacattgtttgaaaaggcaattcaagaacaagggcgagggcagattgtg
gatacaatttcagagatacaagagaggcacgatgctattcaggaaattgagaaggggttg
attgagcttcaccaactattcctagacatggcagtcttggtggaggcacagggataccaa
ctgaatgacatcgagagccacgtggctcgtgctagttcttttgtcatgagaggggctgac
caactggagttagccaaggaatatcagaagagctcaaagaaatggggttgcattgccctt
gctattgccgtctttctccttgttatcatcttgtttcccgttttatcatcaaccttattg
aagaacgcataa

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