Gossypium hirsutum (upland cotton): 107947567
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Entry
107947567 CDS
T04793
Name
(RefSeq) syntaxin-124-like
KO
K08486
syntaxin 1B/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107947567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107947567
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107947567
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107947567
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107947567
Exosomal proteins of other body fluids (saliva and urine)
107947567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
STX6_10_61_N
DUF6261
Allexi_40kDa
SURF6
Laminin_II
Spectrin_SYNE1
MCPsignal
Motif
Other DBs
NCBI-GeneID:
107947567
NCBI-ProteinID:
XP_016737670
UniProt:
A0A1U8NF74
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Position
D12:45727322..45728680
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AA seq
303 aa
AA seq
DB search
MNDLFSSSFKKYSDLKQQVHLDDVEAGEETVNLDNFFEDVDNVKDDMRVVEQIYNRLQES
NEETKTAHSAKAMKDLRARMDSDVKQLLKRVKVIKGKLEALEKSNAAHQKLPGSGPGSSA
YRTRTSLVSGLGSKLKDMMDDFQGLRAKMTAEYKETVERRYFTVTGQKADEEMIENLIER
GEGETLFEKAIQEQGRGQIVDTISEIQERHDAIQEIEKGLIELHQLFLDMAVLVEAQGYQ
LNDIESHVARASSFVMRGADQLELAKEYQKSSKKWGCIALAIAVFLLVIILFPVLSSTLL
KNA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgttttctagttcattcaagaaatattcagatctcaagcaacaagttcac
ttggatgacgtagaggctggggaagagacagtgaaccttgataacttctttgaagatgta
gacaatgtgaaggacgatatgagagtggttgagcagatttacaacaggctgcaagaatca
aatgaagagaccaaaacggctcacagtgctaaagccatgaaggatcttcgagctcgaatg
gactcggatgttaagcagctcctgaaacgggtcaaagtcataaaggggaaactcgaagca
cttgaaaaatcaaatgcggctcatcagaaacttccaggatctggtcctggatcatctgct
tatagaaccaggacatccctagtgagcggcttaggcagtaaactaaaggatatgatggat
gattttcaagggttaagagccaaaatgacagcagaatacaaagaaacagtggagagaaga
tacttcacagtaacaggacagaaagcagatgaagaaatgatcgaaaacctgatagaaagg
ggagaaggtgaaacattgtttgaaaaggcaattcaagaacaagggcgagggcagattgtg
gatacaatttcagagatacaagagaggcacgatgctattcaggaaattgagaaggggttg
attgagcttcaccaactattcctagacatggcagtcttggtggaggcacagggataccaa
ctgaatgacatcgagagccacgtggctcgtgctagttcttttgtcatgagaggggctgac
caactggagttagccaaggaatatcagaagagctcaaagaaatggggttgcattgccctt
gctattgccgtctttctccttgttatcatcttgtttcccgttttatcatcaaccttattg
aagaacgcataa
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