Gossypium hirsutum (upland cotton): 107948128
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Entry
107948128 CDS
T04793
Name
(RefSeq) cactin isoform X1
KO
K25058
cactin
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107948128
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Complex C specific factors
107948128
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CactinC_cactus
Cactin_mid
Motif
Other DBs
NCBI-GeneID:
107948128
NCBI-ProteinID:
XP_016738084
UniProt:
A0A1U8NJN8
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Position
A04:complement(62636521..62640764)
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AA seq
711 aa
AA seq
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MANFINMKVKFLKSVKPDPGRDPKFILIVGGWSANQKPYPVMAGSSRSKRRSYDDSASES
ESGETDSGDSSPDRRSRKRSKDRSRRSKSKSSRHSRSRSRRGRDSEEDSGDDSDGSDRGR
SKKKRSSRNITEEEIAEYMAKKAQKKATRAAKKLKAQTVSGYSNDSNPFGDSNLNEKFVW
RKKIERDVAQGVPLDTFSVKAEKKRQKERMAEIEKVKKRREERALEKAQHEEEMALLARE
RARAEFDDWEKKEEEFHFDQSKVRSEIRLREGRTKPIDILSKHLNGSDDMDIELNEPYMV
FKGLTAKEMEELRDDIKMHLDLDRATPTHIVYWEALMVVCDWELAEARKKDALDRARVRG
EEPPAELLAEERGLHSTIEADVKNLLEGKTHRELEALQSQIESQMQTGTAKVVEYWEAVL
KCLHIFKAKACLKEIHAKMLRKHLQRLEQPSEGEDRLESDNGLRPVEEASDHDEKVDAET
YSPEPIIQEETHEVEEEAGSFSPELLHGDENEEAIDPEEDRAILERKRMAVLEEQQRRMQ
EALKSKPAPSEDNFELKAMKAMGAMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFN
RVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPVYTIEKDGNSSETCI
IRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttcataaacatgaaggttaagtttttaaagtcggttaaacccgaccctggg
cgggatccaaaatttatcttaatagttggaggttggtctgcaaatcaaaaaccctatcct
gtcatggcaggaagtagtcgaagcaaaagaagatcttacgacgattcggcttccgagtct
gaatcaggcgaaaccgacagcggagattcttctcctgacagaagatcccgcaaacgcagc
aaggatagaagccgtcgcagtaaaagcaaaagcagccgccatagccgtagccggagccgt
cgcggtcgtgattccgaagaggattccggtgatgatagcgatggaagcgatcgagggcgt
agtaagaagaagagatcttctagaaacatcacggaagaggaaattgctgagtatatggca
aagaaagcacaaaagaaggcaacgcgagctgcgaagaaattgaaagcacaaacagtatcg
ggttattcaaatgattcaaatccttttggcgattcgaatctcaacgagaaatttgtttgg
cggaagaaaatcgagcgtgatgttgcccaaggggtgccattggacacgttttcagtgaaa
gctgagaagaagagacaaaaagagagaatggctgagattgaaaaagttaaaaagagaagg
gaggaaagggcacttgagaaagcacaacatgaggaagaaatggctttgctagctagagaa
cgtgctagagctgagtttgacgattgggagaagaaggaggaggagttccattttgatcaa
agcaaagtcagatcagagattagattgcgtgaaggccgtacaaagcctattgatattttg
tccaagcatctgaatggctctgatgatatggatatagagctaaatgaaccatacatggtt
ttcaagggtttgacggctaaagagatggaagagcttcgtgatgacatcaaaatgcatctt
gatttggatagggcaactccaacacacatagtttactgggaggcacttatggtggtatgt
gattgggagctagctgaagcccggaagaaggatgcacttgatcgagctagggtgcgtggg
gaggaacctccagctgagttgctagcagaagaaaggggactgcattctactattgaagca
gatgtcaagaatcttttggaagggaagacccaccgtgagctggaggcattacaatcccag
attgagtcacagatgcaaactggcacggcaaaagttgtcgagtattgggaggctgttctt
aaatgtcttcatattttcaaagcgaaggcctgtttgaaggaaatacatgctaaaatgctg
cgtaaacatttgcaacgccttgagcaaccttcagaaggtgaagatagactggaatctgat
aatggtttaagacctgtggaggaggccagtgatcatgatgagaaagtagatgctgaaaca
tattctccggaaccgataatacaagaagagactcatgaggtggaagaagaggctggatcc
ttttcaccagaactgttgcatggtgatgaaaatgaagaagctattgacccagaggaggac
agggctatattggaaaggaaacgtatggctgtgttagaggagcagcaaagacggatgcaa
gaagctttgaaatcgaaacctgccccttcagaagataactttgagctaaaagccatgaaa
gctatgggagcaatggaggagggtgatgcagtatttggctctggtgctgaagttaacttg
gactcgcaggtgtattggtggcatgataaataccgtcctagaaaaccaaaatatttcaac
cgtgttcacactggatatgagtggaacaagtacaatcagacccattatgatcatgataac
cctcctcccaagattgtgcaaggatataaatttaatatcttctaccctgaccttgttgac
aagacaaaggctcctgtatacactattgagaaggatggtaatagttcagaaacgtgcatc
ataaggtttcatgctggaccgccctacgaggacattgcattccgaattgtaaacaaggag
tgggaatattctcataagaagggatttaaatgcacattcgaacgtggaattttgcatgta
tattttaacttcaagcgatatcgctaccgtaggtaa
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