Gossypium hirsutum (upland cotton): 107948173
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Entry
107948173 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107948173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107948173
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107948173
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107948173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
107948173
NCBI-ProteinID:
XP_016738129
UniProt:
A0A1U8NJT0
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All DBs
Position
A12:complement(81442304..81446764)
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AA seq
323 aa
AA seq
DB search
MESDSIDCMASSDVMDDDEIHHHQLSSSLSKTHSNNGNSNNSTLSSAVHASTTSVHELLE
CPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK
YMSLGCPEIFPYYSKLKHEALCNFRPYSCPYAGSECAVVGDIPFLVTHLRDDHKVDMHSG
CTFNHRYVKSNPQEVENAIWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDEIEA
RNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
VTGRIWKEQQNPEGGACIPNLCS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatagtattgattgtatggcatcatcggatgtgatggatgatgatgagatc
catcatcatcagttatcttcttcattgtcaaagacccacagcaacaatgggaacagcaac
aacagtaccttgtcatcagctgttcatgcaagcactactagtgtccatgaactccttgaa
tgccctgtttgtaccaattctatgtaccctcctattcatcagtgccacaatgggcatact
ctctgttcaacttgtaaaacgagggtacacaatcgatgccccacttgtagacaagagctc
ggtgatattaggtgtctagcactagagaaggtggctgaatcacttgaattaccttgcaaa
tatatgtcacttggatgccctgagatctttccctactatagtaaactcaagcatgaggct
ctatgcaacttcaggccgtatagttgcccatatgctggatcggaatgtgctgttgttggt
gatattccattccttgttacacatctaagggatgaccacaaggtggacatgcattctgga
tgcacgtttaaccatcgatatgtgaagtctaatcctcaagaagtagaaaatgcaatatgg
atgctaactgtatttcattgttttggtcaatacttctgtctccattttgaagccttccag
ctcggagtggctcctgtttacatggcattccttcgtttcatgggcgatgagattgaagct
cgcaactacagttatagcctagaagttggagggaatggtaggaaactcacttgggaaggc
accccgagaagcataagagatagccaccgaaaggttcgggatagccacgatggccttatt
atacagcgtaacatggcgcttttcttctctggaggggatagaaaagagttgaaactacga
gtaacggggcggatatggaaagaacaacaaaacccggaaggtggtgcctgtatacccaac
ctttgtagttaa
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